RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 ABCB8Q9NUT2 735 aa12.18□□□□□ -0.46
DDB1-223ENST00000543658 NDFIP2Q9NV92 336 aa12.18□□□□□ -0.46
DDB1-223ENST00000543658 HAUS2Q9NVX0 235 aa12.18□□□□□ -0.46
DDB1-223ENST00000543658 SMARCAL1Q9NZC9 954 aa12.18□□□□□ -0.46
DDB1-223ENST00000543658 DTLQ9NZJ0 730 aa12.18□□□□□ -0.46
DDB1-223ENST00000543658 SLC25A13Q9UJS0 675 aa12.18□□□□□ -0.46
DDB1-223ENST00000543658 DUSP12Q9UNI6 340 aa12.18□□□□□ -0.46
DDB1-223ENST00000543658 SORCS3Q9UPU3 1222 aa12.18□□□□□ -0.46
DDB1-223ENST00000543658 TBC1D30Q9Y2I9 924 aa12.18□□□□□ -0.46
DDB1-223ENST00000543658 C5orf42Q9H799 3197 aa12.18□□□□□ -0.46
DDB1-223ENST00000543658 TCRBV7S2A1N4TA0A589 114 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 CTAGE15A4D2H0 777 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 ZSCAN5CA6NGD5 496 aaPredicted RBP12.17□□□□□ -0.46
DDB1-223ENST00000543658 CBX4O00257 560 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 PHF2O75151 1096 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 TULP3O75386 442 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 STK10O94804 968 aaKnown RBP12.17□□□□□ -0.46
DDB1-223ENST00000543658 CTAGE8P0CG41 777 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 RBP3P10745 1247 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 POLR2EP19388 210 aaKnown RBP12.17□□□□□ -0.46
DDB1-223ENST00000543658 GARSP41250 739 aaKnown RBP12.17□□□□□ -0.46
DDB1-223ENST00000543658 PAPOLAP51003 745 aaKnown RBP12.17□□□□□ -0.46
DDB1-223ENST00000543658 GEMIN4P57678 1058 aaKnown RBP12.17□□□□□ -0.46
DDB1-223ENST00000543658 LMNB2Q03252 620 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 SULT2A1Q06520 285 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 ADCY2Q08462 1091 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 GALNT2Q10471 571 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 XRCC4Q13426 336 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 SNX1Q13596 522 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 DMC1Q14565 340 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 E2F5Q15329 346 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 DARS2Q6PI48 645 aaKnown RBP12.17□□□□□ -0.46
DDB1-223ENST00000543658 GSTA5Q7RTV2 222 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 CTAGE6Q86UF2 777 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 SUGP1Q8IWZ8 645 aaKnown RBP12.17□□□□□ -0.46
DDB1-223ENST00000543658 CTAGE4Q8IX94 777 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 BBS5Q8N3I7 341 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 DCAF4L2Q8NA75 395 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 OR7D4Q8NG98 312 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 WFDC5Q8TCV5 224 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 GRK7Q8WTQ7 553 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 UCMAQ8WVF2 138 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 TFB1MQ8WVM0 346 aaKnown RBP12.17□□□□□ -0.46
DDB1-223ENST00000543658 C1orf54Q8WWF1 131 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 ARHGEF2Q92974 986 aaKnown RBP12.17□□□□□ -0.46
DDB1-223ENST00000543658 MAGOHBQ96A72 148 aaKnown RBP12.17□□□□□ -0.46
DDB1-223ENST00000543658 HDAC11Q96DB2 347 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 HMCESQ96FZ2 354 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 RUNDC3BQ96NL0 473 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 PNKPQ96T60 521 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 FAM118BQ9BPY3 351 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 HERPUD2Q9BSE4 406 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 LRRC19Q9H756 370 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 SLC2A4RGQ9NR83 387 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 SAE1Q9UBE0 346 aaPredicted RBP12.17□□□□□ -0.46
DDB1-223ENST00000543658 ZNF212Q9UDV6 495 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 FBXL21Q9UKT6 434 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 ZNF148Q9UQR1 794 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 PIAS3Q9Y6X2 628 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 ANKRD36A6QL64 1941 aa12.17□□□□□ -0.46
DDB1-223ENST00000543658 MYO18AQ92614 2054 aaKnown RBP12.17□□□□□ -0.46
DDB1-223ENST00000543658 A0A0D9SEW6 157 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 CFAP69A5D8W1 941 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 SPECC1L-ADORA2AF8WAN1 911 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 ARNTLO00327 626 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 MTSS1O43312 755 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 NARSO43776 548 aaKnown RBP12.16□□□□□ -0.46
DDB1-223ENST00000543658 GLULP15104 373 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 MZF1P28698 734 aaPredicted RBP12.16□□□□□ -0.46
DDB1-223ENST00000543658 HLA-FP30511 346 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 CD70P32970 193 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 ACTN2P35609 894 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 ACVRL1P37023 503 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 NNMTP40261 264 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 SERINC3Q13530 473 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 BYSLQ13895 437 aaKnown RBP12.16□□□□□ -0.46
DDB1-223ENST00000543658 CCNG2Q16589 344 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 PLEKHG6Q3KR16 790 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 FSCBQ5H9T9 825 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 PITRM1Q5JRX3 1037 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 RNF43Q68DV7 783 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 RETSATQ6NUM9 610 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 C12orf40Q86WS4 652 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 RALGPS2Q86X27 583 aaPredicted RBP12.16□□□□□ -0.46
DDB1-223ENST00000543658 ARHGAP12Q8IWW6 846 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 ETFBKMTQ8IXQ9 262 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 CCDC13Q8IYE1 715 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 CCDC105Q8IYK2 499 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 CCDC33Q8N5R6 958 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 NETO2Q8NC67 525 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 ATG4AQ8WYN0 398 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 ACDQ96AP0 544 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 QKIQ96PU8 341 aaKnown RBP eCLIP12.16□□□□□ -0.46
DDB1-223ENST00000543658 P2RY13Q9BPV8 354 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 CIPCQ9C0C6 399 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 HEBP1Q9NRV9 189 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 SEPT10Q9P0V9 454 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 IPO11Q9UI26 975 aaKnown RBP12.16□□□□□ -0.46
DDB1-223ENST00000543658 SLC8A2Q9UPR5 921 aa12.16□□□□□ -0.46
DDB1-223ENST00000543658 SLC27A6Q9Y2P4 619 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms