RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 LIMD1Q9UGP4 676 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 TPRKBQ9Y3C4 175 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 RAP2CQ9Y3L5 183 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 TRMUO75648 421 aaKnown RBP19.69■□□□□ 0.74
SUDS3-204ENST00000543473 GRIA4P48058 902 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 VGLL4Q14135 290 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 C7orf26Q96N11 449 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 GPR63Q9BZJ6 419 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 REXO4Q9GZR2 422 aaKnown RBP19.69■□□□□ 0.74
SUDS3-204ENST00000543473 RMND5AQ9H871 391 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 SNRPB2P08579 225 aaKnown RBP19.69■□□□□ 0.74
SUDS3-204ENST00000543473 OAZ1P54368 228 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 TMEM63BQ5T3F8 832 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 ADGRD1Q6QNK2 874 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 CHSY1Q86X52 802 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 CYP4X1Q8N118 509 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 SFRP1Q8N474 314 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 ACE2Q9BYF1 805 aaPredicted RBP19.69■□□□□ 0.74
SUDS3-204ENST00000543473 TRHDEQ9UKU6 1024 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 SYNPO2Q9UMS6 1093 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 NID2Q14112 1375 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 LY6KQ17RY6 165 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 UGT3A1Q6NUS8 523 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 FAM126BQ8IXS8 530 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 CDCA5Q96FF9 252 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 MPP6Q9NZW5 540 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 CCDC154A6NI56 674 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 FAM20BO75063 409 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 GLP2RO95838 553 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 TRUB2O95900 331 aaKnown RBP19.69■□□□□ 0.74
SUDS3-204ENST00000543473 ZNF143P52747 638 aaPredicted RBP19.69■□□□□ 0.74
SUDS3-204ENST00000543473 FCGRTP55899 365 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 LPIN1Q14693 890 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 TDRPQ86YL5 185 aa19.69■□□□□ 0.74
SUDS3-204ENST00000543473 PDZK1P1A8MUH7 402 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 TMEM114B3SHH9 223 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 SCARA3Q6AZY7 606 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 C8orf59Q8N0T1 100 aaPredicted RBP19.68■□□□□ 0.74
SUDS3-204ENST00000543473 OR52K1Q8NGK4 314 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 PEX11AO75192 247 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 ALOX12P18054 663 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 KRT33BQ14525 404 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 SPDYE7PQ495Y7 208 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.68■□□□□ 0.74
SUDS3-204ENST00000543473 SETD9Q8NE22 299 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 ITFG1Q8TB96 612 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 UGT2B28Q9BY64 529 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 RRAGCQ9HB90 399 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 CDH22Q9UJ99 828 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 STXBP5LQ9Y2K9 1186 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 CASZ1Q86V15 1759 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 TMEM191CA6NGB0 347 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 PRR23D1E9PI22 279 aaPredicted RBP19.68■□□□□ 0.74
SUDS3-204ENST00000543473 PRR23D2P0DMB1 279 aaPredicted RBP19.68■□□□□ 0.74
SUDS3-204ENST00000543473 CDH3P22223 829 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 PSMB4P28070 264 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 WDR4P57081 412 aaKnown RBP19.68■□□□□ 0.74
SUDS3-204ENST00000543473 RTP1P59025 263 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 MAPRE1Q15691 268 aaKnown RBP19.68■□□□□ 0.74
SUDS3-204ENST00000543473 CEP78Q5JTW2 689 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 PTCD3Q96EY7 689 aaKnown RBP19.68■□□□□ 0.74
SUDS3-204ENST00000543473 PLEKHA8Q96JA3 519 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 RTKNQ9BST9 563 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 RAD21L1Q9H4I0 556 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 ADAM28Q9UKQ2 775 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 YWHAZP63104 245 aaKnown RBP19.68■□□□□ 0.74
SUDS3-204ENST00000543473 POLD3Q15054 466 aaPredicted RBP19.68■□□□□ 0.74
SUDS3-204ENST00000543473 ZNF484Q5JVG2 852 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 BROXQ5VW32 411 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 FAM47BQ8NA70 645 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 FNDC5Q8NAU1 212 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 KLHL23Q8NBE8 558 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 CPB2Q96IY4 423 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 RERGLQ9H628 205 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 CDHR5Q9HBB8 845 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 VTA1Q9NP79 307 aa19.68■□□□□ 0.74
SUDS3-204ENST00000543473 GNEQ9Y223 722 aaKnown RBP19.68■□□□□ 0.74
SUDS3-204ENST00000543473 FAM95CA0A1B0GW59 222 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 C2orf81A6NN90 581 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 TGFB3P10600 412 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 USP46P62068 366 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 KLF10Q13118 480 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 DGCR6Q14129 220 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 ZNF570Q96NI8 536 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 TMEM59LQ9UK28 342 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 SH3GLB1Q9Y371 365 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 CCNA2P20248 432 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 ST13P50502 369 aaKnown RBP19.67■□□□□ 0.74
SUDS3-204ENST00000543473 TMEM26Q6ZUK4 368 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 OR7A2PQ8NGA2 310 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 TRPC4APQ8TEL6 797 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 PRKD2Q9BZL6 878 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 USE1Q9NZ43 259 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 CLUHO75153 1309 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 ANKS6Q68DC2 871 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 BORCS5Q969J3 196 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 GLT1D1Q96MS3 346 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 TMEM165Q9HC07 324 aa19.67■□□□□ 0.74
SUDS3-204ENST00000543473 SSU72Q9NP77 194 aaKnown RBP19.67■□□□□ 0.74
SUDS3-204ENST00000543473 STMN3Q9NZ72 180 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms