RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 CENPIQ92674 756 aaPredicted RBP10.56□□□□□ -0.72
NPIPB4-217ENST00000543449 PCDHB18PQ96TA0 734 aa10.56□□□□□ -0.72
NPIPB4-217ENST00000543449 EIF3CQ99613 913 aaKnown RBP10.56□□□□□ -0.72
NPIPB4-217ENST00000543449 OMDQ99983 421 aa10.56□□□□□ -0.72
NPIPB4-217ENST00000543449 SLC6A17Q9H1V8 727 aa10.56□□□□□ -0.72
NPIPB4-217ENST00000543449 KDM4CQ9H3R0 1056 aa10.56□□□□□ -0.72
NPIPB4-217ENST00000543449 SLC32A1Q9H598 525 aa10.56□□□□□ -0.72
NPIPB4-217ENST00000543449 CAPN10Q9HC96 672 aa10.56□□□□□ -0.72
NPIPB4-217ENST00000543449 PARVAQ9NVD7 372 aa10.56□□□□□ -0.72
NPIPB4-217ENST00000543449 ADAMTS1Q9UHI8 967 aa10.56□□□□□ -0.72
NPIPB4-217ENST00000543449 HS3ST2Q9Y278 367 aa10.56□□□□□ -0.72
NPIPB4-217ENST00000543449 CKAP5Q14008 2032 aa10.56□□□□□ -0.72
NPIPB4-217ENST00000543449 A0A1W2PQJ5 194 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 DCDC2BA2VCK2 349 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 LRRC53A6NM62 1247 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 C4orf47A7E2U8 309 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 TTC34A8MYJ7 566 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 UPK3BL1B0FP48 263 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 UPK3BL2E5RIL1 263 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 ARHGAP33O14559 1287 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 BCAT2O15382 392 aaPredicted RBP10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 OPHN1O60890 802 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 RHOQP17081 205 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 GOT1P17174 413 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 ENGP17813 658 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 CSRP1P21291 193 aaKnown RBP10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 MZF1P28698 734 aaPredicted RBP10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 SLC8A1P32418 973 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 RECQLP46063 649 aaPredicted RBP10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 UBASH3AP57075 661 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 KLHL30Q0D2K2 578 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 SCAPQ12770 1279 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 PTP4A2Q12974 167 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 NR1I3Q14994 352 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 CDO1Q16878 200 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 ACCSLQ4AC99 568 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 C2CD6Q53TS8 623 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 EFHC2Q5JST6 749 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 TCEAL6Q6IPX3 200 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 SLFN11Q7Z7L1 901 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 CIR1Q86X95 450 aaPredicted RBP10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 ZNF683Q8IZ20 524 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 MCOLN2Q8IZK6 566 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 SH2D3CQ8N5H7 860 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 EMC1Q8N766 993 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 ZNF366Q8N895 744 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 FAM172AQ8WUF8 416 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 BAP1Q92560 729 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 SYN2Q92777 582 aaPredicted RBP10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 PTPRN2Q92932 1015 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 TCEAL3Q969E4 200 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 ERLEC1Q96DZ1 483 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 ALG14Q96F25 216 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 CNPY3Q9BT09 278 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 CEP44Q9C0F1 390 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 SMOC1Q9H4F8 434 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 CBX8Q9HC52 389 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 MRPL47Q9HD33 250 aaKnown RBP10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 TMEM74BQ9NUR3 256 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 FBXL12Q9NXK8 326 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 OR12D3Q9UGF7 316 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 SLCO3A1Q9UIG8 710 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 HPCAL4Q9UM19 191 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 OR51B4Q9Y5P0 310 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 SCINQ9Y6U3 715 aa10.55□□□□□ -0.72
NPIPB4-217ENST00000543449 ABCA7Q8IZY2 2146 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 ZSCAN5CA6NGD5 496 aaPredicted RBP10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 PATE3B3GLJ2 98 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 TM4SF5O14894 197 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 MCF2LO15068 1137 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 CBFA2T2O43439 604 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 SRGAP2O75044 1071 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 CER1O95813 267 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 PRNPP04156 253 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 CEACAM1P13688 526 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 TFE3P19532 575 aaPredicted RBP10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 CD27P26842 260 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 L1CAMP32004 1257 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 RFC1P35251 1148 aaPredicted RBP10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 CTSOP43234 321 aaPredicted RBP10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 AFF3P51826 1226 aaKnown RBP10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 ZNF135P52742 658 aaPredicted RBP10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 FANCCQ00597 558 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 DLG2Q15700 870 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 SLC45A4Q5BKX6 768 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 PPM1JQ5JR12 505 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 KIAA0895LQ68EN5 471 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 WDR59Q6PJI9 974 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 C14orf80Q86SX3 495 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 FAM124AQ86V42 546 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 MMAAQ8IVH4 418 aaKnown RBP10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 DEFB119Q8N690 84 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 ATP11CQ8NB49 1132 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 OR2T34Q8NGX1 318 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 FRS2Q8WU20 508 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 TBC1D31Q96DN5 1066 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 PPP1R16AQ96I34 528 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 RPL10LQ96L21 214 aaKnown RBP10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 EPAS1Q99814 870 aa10.54□□□□□ -0.72
NPIPB4-217ENST00000543449 MIR1-1HGQ9H1L0 117 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms