RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 SPA17Q15506 151 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 DPYSL2Q16555 572 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 TMEM139Q8IV31 216 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 SLC35G2Q8TBE7 412 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 GAB3Q8WWW8 586 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 PSMB7Q99436 277 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 GPATCH2LQ9NWQ4 482 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 SUN2Q9UH99 717 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 SLC25A13Q9UJS0 675 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 HS3ST2Q9Y278 367 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 DMDP11532 3685 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 SPAG17Q6Q759 2223 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 A0A0D9SEW6 157 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 SOWAHDA6NJG2 315 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 IPO7O95373 1038 aaKnown RBP18.85■□□□□ 0.61
COPS7A-216ENST00000543170 NDUFV2P19404 249 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 NNMTP40261 264 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 MAGEA1P43355 309 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 HCAR3P49019 387 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 HADHBP55084 474 aaKnown RBP18.85■□□□□ 0.61
COPS7A-216ENST00000543170 GSDMDP57764 484 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 GNA12Q03113 381 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 CA9Q16790 459 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 HADHQ16836 314 aaKnown RBP18.85■□□□□ 0.61
COPS7A-216ENST00000543170 HNRNPA1L2Q32P51 320 aaKnown RBP18.85■□□□□ 0.61
COPS7A-216ENST00000543170 DAB2IPQ5VWQ8 1189 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 C11orf74Q86VG3 221 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 SPC24Q8NBT2 197 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 HMGB4Q8WW32 186 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 KCTD15Q96SI1 283 aaPredicted RBP18.85■□□□□ 0.61
COPS7A-216ENST00000543170 BAG1Q99933 345 aaPredicted RBP18.85■□□□□ 0.61
COPS7A-216ENST00000543170 MAGEH1Q9H213 219 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 NDFIP2Q9NV92 336 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 BCCIPQ9P287 314 aaKnown RBP eCLIP18.85■□□□□ 0.61
COPS7A-216ENST00000543170 VPS51Q9UID3 782 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 EPN1Q9Y6I3 576 aaPredicted RBP18.85■□□□□ 0.61
COPS7A-216ENST00000543170 VPS13AQ96RL7 3174 aa18.85■□□□□ 0.61
COPS7A-216ENST00000543170 A0A0A6YYK5 440 aaPredicted RBP18.84■□□□□ 0.61
COPS7A-216ENST00000543170 EEF2KO00418 725 aaKnown RBP18.84■□□□□ 0.61
COPS7A-216ENST00000543170 RAMP2O60895 175 aa18.84■□□□□ 0.61
COPS7A-216ENST00000543170 RPP40O75818 363 aaKnown RBP18.84■□□□□ 0.61
COPS7A-216ENST00000543170 HLA-EP13747 358 aa18.84■□□□□ 0.61
COPS7A-216ENST00000543170 TCF4P15884 667 aa18.84■□□□□ 0.61
COPS7A-216ENST00000543170 CLCN6P51797 869 aa18.84■□□□□ 0.61
COPS7A-216ENST00000543170 COPAP53621 1224 aa18.84■□□□□ 0.61
COPS7A-216ENST00000543170 USP39Q53GS9 565 aaKnown RBP18.84■□□□□ 0.61
COPS7A-216ENST00000543170 METTL3Q86U44 580 aaKnown RBP18.84■□□□□ 0.61
COPS7A-216ENST00000543170 OR2T3Q8NH03 318 aa18.84■□□□□ 0.61
COPS7A-216ENST00000543170 NKD2Q969F2 451 aaPredicted RBP18.84■□□□□ 0.61
COPS7A-216ENST00000543170 FAM122AQ96E09 287 aa18.84■□□□□ 0.61
COPS7A-216ENST00000543170 MRGPRX1Q96LB2 322 aa18.84■□□□□ 0.61
COPS7A-216ENST00000543170 ACE2Q9BYF1 805 aaPredicted RBP18.84■□□□□ 0.61
COPS7A-216ENST00000543170 TPSD1Q9BZJ3 242 aa18.84■□□□□ 0.61
COPS7A-216ENST00000543170 ZWILCHQ9H900 591 aa18.84■□□□□ 0.61
COPS7A-216ENST00000543170 PCDHA13Q9Y5I0 950 aa18.84■□□□□ 0.61
COPS7A-216ENST00000543170 EDDM13A0A1B0GTR0 161 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 TARSL2A2RTX5 802 aaKnown RBP18.83■□□□□ 0.6
COPS7A-216ENST00000543170 HRO43593 1189 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 ATP9BO43861 1147 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 ZNF217O75362 1048 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 RARAP10276 462 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 P2RY2P41231 377 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 STK19P49842 368 aaPredicted RBP18.83■□□□□ 0.6
COPS7A-216ENST00000543170 YBEYP58557 167 aaPredicted RBP18.83■□□□□ 0.6
COPS7A-216ENST00000543170 BYSLQ13895 437 aaKnown RBP18.83■□□□□ 0.6
COPS7A-216ENST00000543170 SMTNL2Q2TAL5 461 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 RAD9BQ6WBX8 426 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 RFX8Q6ZV50 586 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 UMODL1-AS1Q8N2C9 162 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 SH2D3CQ8N5H7 860 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 OR7D4Q8NG98 312 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 ARHGEF2Q92974 986 aaKnown RBP18.83■□□□□ 0.6
COPS7A-216ENST00000543170 SPACA7Q96KW9 195 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 RPL10LQ96L21 214 aaKnown RBP18.83■□□□□ 0.6
COPS7A-216ENST00000543170 PHOX2BQ99453 314 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 MKRN2Q9H000 416 aaKnown RBP18.83■□□□□ 0.6
COPS7A-216ENST00000543170 GRPEL1Q9HAV7 217 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 ATP13A1Q9HD20 1204 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 PRSS16Q9NQE7 514 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.83■□□□□ 0.6
COPS7A-216ENST00000543170 RCOR3Q9P2K3 495 aaPredicted RBP18.83■□□□□ 0.6
COPS7A-216ENST00000543170 DNAI1Q9UI46 699 aa18.83■□□□□ 0.6
COPS7A-216ENST00000543170 H3BRJ5 948 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 ZMPSTE24O75844 475 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 LMNAP02545 664 aaKnown RBP18.82■□□□□ 0.6
COPS7A-216ENST00000543170 ARL4AP40617 200 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 SLC20A2Q08357 652 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 DPYSQ14117 519 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 PARP15Q460N3 678 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 PPP6R3Q5H9R7 873 aaPredicted RBP18.82■□□□□ 0.6
COPS7A-216ENST00000543170 KCNT1Q5JUK3 1230 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 TXNRD3NBQ6F5E7 133 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 RETSATQ6NUM9 610 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 POLNQ7Z5Q5 900 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 PGBD3Q8N328 593 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 ZNF366Q8N895 744 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 SUMF1Q8NBK3 374 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 FAM71BQ8TC56 605 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 FRS2Q8WU20 508 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 CALR3Q96L12 384 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms