RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	COX16	Q9P0S2	106 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	BCAP29	Q9UHQ4	241 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	PHF24	Q9UPV7	400 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	MATN2	O00339	956 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	H2AFY	O75367	372 aa	Known RBP	13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	TNFAIP8	O95379	198 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	PENK	P01210	267 aa	Predicted RBP	13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	CCR10	P46092	362 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	BST2	Q10589	180 aa	Known RBP	13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	GK3P	Q14409	553 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	HSP90AA5P	Q58FG0	334 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	PIGG	Q5H8A4	983 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	SEL1L3	Q68CR1	1132 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	KLHDC10	Q6PID8	442 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	B3GNT6	Q6ZMB0	384 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	STRADA	Q7RTN6	431 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	CLEC14A	Q86T13	490 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	FBXO16	Q8IX29	292 aa	Predicted RBP	13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	DNAAF3	Q8N9W5	541 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	DNAJC1	Q96KC8	554 aa	Known RBP	13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	CNDP1	Q96KN2	507 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	IRAK4	Q9NWZ3	460 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	RIMS3	Q9UJD0	308 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	TMCO1	Q9UM00	188 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	GNE	Q9Y223	722 aa	Known RBP	13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	RAP2C	Q9Y3L5	183 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	KCNK1	O00180	336 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	SOCS7	O14512	581 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	HDAC3	O15379	428 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	PDGFRB	P09619	1106 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	INSRR	P14616	1297 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	RPL14	P50914	215 aa	Known RBP	13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	MS4A2	Q01362	244 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	NXN	Q6DKJ4	435 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	GALNT4	Q8N4A0	578 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	ADCY4	Q8NFM4	1077 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	ADAM32	Q8TC27	787 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	RNF139	Q8WU17	664 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	ZFR	Q96KR1	1074 aa	Known RBP	13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	CATSPER2	Q96P56	530 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	PRPF18	Q99633	342 aa	Known RBP	13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	NUF2	Q9BZD4	464 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	CXCL16	Q9H2A7	254 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	OXSM	Q9NWU1	459 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	BFAR	Q9NZS9	450 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	IGSF9	Q9P2J2	1179 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.19	□□□□□ -0.3
DDX11-223	ENST00000542838		A0A0G2JMZ2	1700 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	LRRC37A2	A6NM11	1700 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	PYGL	P06737	847 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	CYP2C8	P10632	490 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	MYBPC1	Q00872	1141 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	POU5F1B	Q06416	359 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	CEACAM7	Q14002	265 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	SH3D19	Q5HYK7	790 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	C6orf52	Q5T4I8	152 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	ARHGAP17	Q68EM7	881 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	NT5DC4	Q86YG4	428 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	TMEM126B	Q8IUX1	230 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	TP53INP2	Q8IXH6	220 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	DEFB106A	Q8N104	65 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	LILRA2	Q8N149	483 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	AHI1	Q8N157	1196 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	FAM149B1	Q96BN6	582 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	LENG1	Q96BZ8	264 aa	Predicted RBP	13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	MPHOSPH6	Q99547	160 aa	Known RBP	13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	VANGL2	Q9ULK5	521 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	MYOCOS	A0A1B0GUC4	107 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	PIGN	O95427	931 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	PPARG	P37231	505 aa	Predicted RBP	13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	BCAT1	P54687	386 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	MPP3	Q13368	585 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	TBC1D25	Q3MII6	688 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	SETD3	Q86TU7	594 aa	Predicted RBP	13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	LCA5	Q86VQ0	697 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	PSTK	Q8IV42	348 aa	Known RBP	13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	ANKRD52	Q8NB46	1076 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	ACVR1C	Q8NER5	493 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	MFSD3	Q96ES6	412 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	PKP2	Q99959	881 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	ACE2	Q9BYF1	805 aa	Predicted RBP	13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	TASP1	Q9H6P5	420 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	PLK2	Q9NYY3	685 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	MID2	Q9UJV3	735 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	VPS28	Q9UK41	221 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	HES2	Q9Y543	173 aa		13.18	□□□□□ -0.3
DDX11-223	ENST00000542838	ZCWPW2	A0A1B0GU75	182 aa		13.17	□□□□□ -0.3
DDX11-223	ENST00000542838	TMCC1	O94876	653 aa		13.17	□□□□□ -0.3
DDX11-223	ENST00000542838	TXN	P10599	105 aa	Known RBP	13.17	□□□□□ -0.3
DDX11-223	ENST00000542838	ME2	P23368	584 aa		13.17	□□□□□ -0.3
DDX11-223	ENST00000542838	GRIA4	P48058	902 aa		13.17	□□□□□ -0.3
DDX11-223	ENST00000542838	ART3	Q13508	389 aa		13.17	□□□□□ -0.3
DDX11-223	ENST00000542838	MYLK3	Q32MK0	819 aa		13.17	□□□□□ -0.3
DDX11-223	ENST00000542838	TMEM198	Q66K66	360 aa		13.17	□□□□□ -0.3
DDX11-223	ENST00000542838	TICAM1	Q8IUC6	712 aa		13.17	□□□□□ -0.3
DDX11-223	ENST00000542838	PGAM4	Q8N0Y7	254 aa		13.17	□□□□□ -0.3
DDX11-223	ENST00000542838	KBTBD7	Q8WVZ9	684 aa		13.17	□□□□□ -0.3
DDX11-223	ENST00000542838	NLRP7	Q8WX94	980 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms