RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 RFWD3Q6PCD5 774 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 C3orf62Q6ZUJ4 267 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 PALM2Q8IXS6 379 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 LGI2Q8N0V4 545 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 MCUQ8NE86 351 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 USP33Q8TEY7 942 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 SLC22A17Q8WUG5 538 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 TSGA13Q96PP4 275 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 SLC22A12Q96S37 553 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 PHACTR1Q9C0D0 580 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 NOL6Q9H6R4 1146 aaKnown RBP11.28□□□□□ -0.6
SCG3-202ENST00000542355 TMEM248Q9NWD8 314 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 DONSONQ9NYP3 566 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 IGSF9Q9P2J2 1179 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 ADAM21Q9UKJ8 722 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 NOVA2Q9UNW9 492 aaKnown RBP11.28□□□□□ -0.6
SCG3-202ENST00000542355 RWDD3Q9Y3V2 267 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 HMGB1P1B2RPK0 211 aaPredicted RBP11.27□□□□□ -0.6
SCG3-202ENST00000542355 F5H5T6 163 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 GRM6O15303 877 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 MBL2P11226 248 aaPredicted RBP11.27□□□□□ -0.6
SCG3-202ENST00000542355 CCNB1P14635 433 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 HDCP19113 662 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 TPSB2P20231 275 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 SSTR1P30872 391 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 CORO1AP31146 461 aaKnown RBP11.27□□□□□ -0.6
SCG3-202ENST00000542355 SLC6A4P31645 630 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 GPX6P59796 221 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 ZNF33AQ06730 810 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 TPSAB1Q15661 275 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 FAM133BQ5BKY9 247 aaKnown RBP11.27□□□□□ -0.6
SCG3-202ENST00000542355 IGDCC3Q8IVU1 814 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 UMODL1-AS1Q8N2C9 162 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.27□□□□□ -0.6
SCG3-202ENST00000542355 ARL14EPQ8N8R7 260 aaPredicted RBP11.27□□□□□ -0.6
SCG3-202ENST00000542355 TTC16Q8NEE8 873 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 ZSCAN18Q8TBC5 510 aaPredicted RBP11.27□□□□□ -0.6
SCG3-202ENST00000542355 PLD4Q96BZ4 506 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 VAT1Q99536 393 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 PLCD4Q9BRC7 762 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 TMEM109Q9BVC6 243 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 KLF16Q9BXK1 252 aaPredicted RBP11.27□□□□□ -0.6
SCG3-202ENST00000542355 FRMD8Q9BZ67 464 aaPredicted RBP11.27□□□□□ -0.6
SCG3-202ENST00000542355 ROPN1BQ9BZX4 212 aaPredicted RBP11.27□□□□□ -0.6
SCG3-202ENST00000542355 ROPN1Q9HAT0 212 aaPredicted RBP11.27□□□□□ -0.6
SCG3-202ENST00000542355 RSPH14Q9UHP6 348 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 TRHDEQ9UKU6 1024 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 CHMP2BQ9UQN3 213 aa11.27□□□□□ -0.6
SCG3-202ENST00000542355 ALPK3Q96L96 1907 aa11.27□□□□□ -0.61
SCG3-202ENST00000542355 A0A087WUV0 522 aaPredicted RBP11.27□□□□□ -0.61
SCG3-202ENST00000542355 TRDMT1O14717 391 aaKnown RBP11.27□□□□□ -0.61
SCG3-202ENST00000542355 RGS16O15492 202 aaPredicted RBP11.27□□□□□ -0.61
SCG3-202ENST00000542355 CA3P07451 260 aa11.27□□□□□ -0.61
SCG3-202ENST00000542355 OR1E1P30953 314 aa11.27□□□□□ -0.61
SCG3-202ENST00000542355 CD68P34810 354 aaPredicted RBP11.27□□□□□ -0.61
SCG3-202ENST00000542355 IRS1P35568 1242 aa11.27□□□□□ -0.61
SCG3-202ENST00000542355 NDST2P52849 883 aa11.27□□□□□ -0.61
SCG3-202ENST00000542355 SARNPP82979 210 aaKnown RBP11.27□□□□□ -0.61
SCG3-202ENST00000542355 CYP4F8P98187 520 aa11.27□□□□□ -0.61
SCG3-202ENST00000542355 GAREM2Q75VX8 874 aa11.27□□□□□ -0.61
SCG3-202ENST00000542355 ZNF534Q76KX8 674 aa11.27□□□□□ -0.61
SCG3-202ENST00000542355 ZNF354CQ86Y25 554 aa11.27□□□□□ -0.61
SCG3-202ENST00000542355 AGGF1Q8N302 714 aaeCLIP11.27□□□□□ -0.61
SCG3-202ENST00000542355 FAM76AQ8TAV0 307 aa11.27□□□□□ -0.61
SCG3-202ENST00000542355 WBP2Q969T9 261 aa11.27□□□□□ -0.61
SCG3-202ENST00000542355 TEKT5Q96M29 485 aa11.27□□□□□ -0.61
SCG3-202ENST00000542355 CCDC77Q9BR77 488 aa11.27□□□□□ -0.61
SCG3-202ENST00000542355 IPO11Q9UI26 975 aaKnown RBP11.27□□□□□ -0.61
SCG3-202ENST00000542355 AGO1Q9UL18 857 aaKnown RBP11.27□□□□□ -0.61
SCG3-202ENST00000542355 TEX264Q9Y6I9 313 aa11.27□□□□□ -0.61
SCG3-202ENST00000542355 CLUHO75153 1309 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 GREB1Q4ZG55 1949 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 ZNF638Q14966 1978 aaKnown RBP11.26□□□□□ -0.61
SCG3-202ENST00000542355 ARHGAP42A6NI28 874 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 RASA4BC9J798 803 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 SCAMP3O14828 347 aaKnown RBP11.26□□□□□ -0.61
SCG3-202ENST00000542355 MATN3O15232 486 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 CCL16O15467 120 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 RASA4O43374 803 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 LPXNO60711 386 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 ABHD2P08910 425 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 GJA1P17302 382 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 NUMBP49757 651 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 CLCN4P51793 760 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 SMAD3P84022 425 aaKnown RBP11.26□□□□□ -0.61
SCG3-202ENST00000542355 UBE3AQ05086 875 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 CAMK1Q14012 370 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 ELOAQ14241 798 aaKnown RBP11.26□□□□□ -0.61
SCG3-202ENST00000542355 SPARCL1Q14515 664 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 STAT4Q14765 748 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 SHHQ15465 462 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 CCDC38Q502W7 563 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 PPM1LQ5SGD2 360 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 CROCCP2Q86T23 111 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 ELMOD1Q8N336 334 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 CNTD1Q8N815 330 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 MAB21L3Q8N8X9 362 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 ATP11CQ8NB49 1132 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 HMCESQ96FZ2 354 aa11.26□□□□□ -0.61
SCG3-202ENST00000542355 CORO1BQ9BR76 489 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms