RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 FRMD8Q9BZ67 464 aaPredicted RBP15.65■□□□□ 0.1
CNOT9-208ENST00000542068 TCF7L2Q9NQB0 619 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 MT-CO1P00395 513 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 PRKCGP05129 697 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 USP46P62068 366 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 FAM43BQ6ZT52 329 aaPredicted RBP15.65■□□□□ 0.1
CNOT9-208ENST00000542068 KHSRPQ92945 711 aaKnown RBP eCLIP15.65■□□□□ 0.13e-14■■■□□ 17.9
CNOT9-208ENST00000542068 MFSD3Q96ES6 412 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 PREBQ9HCU5 417 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.65■□□□□ 0.1
CNOT9-208ENST00000542068 H3BNX3 289 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 M0QYT0 321 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 TK2O00142 265 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 HUS1O60921 280 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 SRGAP2BP0DMP2 458 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 SMPD1P17405 629 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 ATICP31939 592 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 SIX6OS1Q8N1H7 587 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 PQLC1Q8N2U9 271 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 BHLHE22Q8NFJ8 381 aaPredicted RBP15.65■□□□□ 0.1
CNOT9-208ENST00000542068 USP33Q8TEY7 942 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 HASPINQ8TF76 798 aa15.65■□□□□ 0.1
CNOT9-208ENST00000542068 GCATO75600 419 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 IGFBP6P24592 240 aaPredicted RBP15.64■□□□□ 0.09
CNOT9-208ENST00000542068 EPHX2P34913 555 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 FBXO47Q5MNV8 452 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 NCBP2-AS2Q69YL0 99 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 EDEM1Q92611 657 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 TASP1Q9H6P5 420 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 ADA2Q9NZK5 511 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 CPA4Q9UI42 421 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 A0A0A0MRY4 1105 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 XPO1O14980 1071 aaKnown RBP15.64■□□□□ 0.09
CNOT9-208ENST00000542068 PIK3R1P27986 724 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 INHBCP55103 352 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 MAP3K7CLP57077 242 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 NADK2Q4G0N4 442 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 FSCBQ5H9T9 825 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 CERCAMQ5T4B2 595 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 LAYNQ6UX15 382 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 APPL2Q8NEU8 664 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 ARNTL2Q8WYA1 636 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 SPATA13Q96N96 652 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 KCNK16Q96T55 309 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 NPAS2Q99743 824 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 OMDQ99983 421 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 ZNF670Q9BS34 389 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 PRDM12Q9H4Q4 367 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 HEMK1Q9Y5R4 338 aaPredicted RBP15.64■□□□□ 0.09
CNOT9-208ENST00000542068 AP4B1Q9Y6B7 739 aa15.64■□□□□ 0.09
CNOT9-208ENST00000542068 GJA5P36382 358 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 NAGLUP54802 743 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 LSAMPQ13449 338 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 ART3Q13508 389 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 ZNF460Q14592 562 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 FSTL4Q6MZW2 842 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 PGM2L1Q6PCE3 622 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 PCDH20Q8N6Y1 951 aaKnown RBP15.63■□□□□ 0.09
CNOT9-208ENST00000542068 SLC7A14Q8TBB6 771 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 CERS2Q96G23 380 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 SIK2Q9H0K1 926 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 LIN28AQ9H9Z2 209 aaKnown RBP15.63■□□□□ 0.09
CNOT9-208ENST00000542068 IARS2Q9NSE4 1012 aaKnown RBP15.63■□□□□ 0.09
CNOT9-208ENST00000542068 COMMD3-BMI1R4GMX3 469 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 TMEM233B4DJY2 109 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 CRTAMO95727 393 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 JUNP05412 331 aaKnown RBP15.63■□□□□ 0.09
CNOT9-208ENST00000542068 CYP2B6P20813 491 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 GRK2P25098 689 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 SCNN1BP51168 640 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 COG7P83436 770 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 DGKDQ16760 1214 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 UGT2A3Q6UWM9 527 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 AMIGO2Q86SJ2 522 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 PIGZQ86VD9 579 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 DSELQ8IZU8 1212 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 RTP4Q96DX8 246 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 GATA5Q9BWX5 397 aaPredicted RBP15.63■□□□□ 0.09
CNOT9-208ENST00000542068 CDH19Q9H159 772 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 ARID2Q68CP9 1835 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 KPNA7A9QM74 516 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 PFDN1O60925 122 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 POLBP06746 335 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 TPSB2P20231 275 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 GP5P40197 560 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 GARSP41250 739 aaKnown RBP15.63■□□□□ 0.09
CNOT9-208ENST00000542068 MAGEA3P43357 314 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 MS4A2Q01362 244 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 TPSAB1Q15661 275 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 TAPT1Q6NXT6 567 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 SNRNP27Q8WVK2 155 aaKnown RBP15.63■□□□□ 0.09
CNOT9-208ENST00000542068 QKIQ96PU8 341 aaKnown RBP eCLIP15.63■□□□□ 0.092e-7■■■□□ 17.8
CNOT9-208ENST00000542068 C16orf70Q9BSU1 422 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 C20orf96Q9NUD7 363 aaPredicted RBP15.63■□□□□ 0.09
CNOT9-208ENST00000542068 MTMR10Q9NXD2 777 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 DNAJB4Q9UDY4 337 aa15.63■□□□□ 0.09
CNOT9-208ENST00000542068 ZNF646O15015 1829 aaPredicted RBP15.63■□□□□ 0.09
CNOT9-208ENST00000542068 ZNF195O14628 629 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 PIGNO95427 931 aa15.62■□□□□ 0.09
CNOT9-208ENST00000542068 PGAM1P18669 254 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms