RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 SETMARQ53H47 684 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 LBHQ53QV2 105 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 EFHC1Q5JVL4 640 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 TPGS2Q68CL5 300 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 ITPRIPL1Q6GPH6 555 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 OGFOD2Q6N063 350 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 RINT1Q6NUQ1 792 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 POMZP3Q6PJE2 187 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 CYP20A1Q6UW02 462 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 C16orf54Q6UWD8 224 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 KIAA0408Q6ZU52 694 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 CREB3L2Q70SY1 520 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 KRT26Q7Z3Y9 468 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 KCNK18Q7Z418 384 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 ZBTB33Q86T24 672 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 CDH24Q86UP0 819 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 LHFPL3Q86UP9 236 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 WDR49Q8IV35 697 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 NLGN1Q8N2Q7 840 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 SRBD1Q8N5C6 995 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 C12orf29Q8N999 325 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 ZBTB38Q8NAP3 1195 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 SPATA20Q8TB22 786 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 PIWIL2Q8TC59 973 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 UTP15Q8TED0 518 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 DENND1AQ8TEH3 1009 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 SH3RF3Q8TEJ3 882 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 RAB2BQ8WUD1 216 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 PSPC1Q8WXF1 523 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 RFFLQ8WZ73 363 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 LPGAT1Q92604 370 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 AKAP1Q92667 903 aaKnown RBP eCLIP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 MAP4K1Q92918 833 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 YIPF5Q969M3 257 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 TP53INP1Q96A56 240 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 C12orf43Q96C57 262 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 SLC25A36Q96CQ1 311 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 C19orf60Q96EN9 201 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 VPS39Q96JC1 886 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 MAGED4Q96JG8 741 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 MAGEB10Q96LZ2 347 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 SERPINI1Q99574 410 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 CCM2Q9BSQ5 444 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 FSD1Q9BTV5 496 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 MKNK1Q9BUB5 465 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 ZNF416Q9BWM5 594 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 OSBPL11Q9BXB4 747 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 TTYH3Q9C0H2 523 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 ZNF700Q9H0M5 742 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 TFB2MQ9H5Q4 396 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 JMJD4Q9H9V9 463 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 CRLF2Q9HC73 371 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 RGS18Q9NS28 235 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 DDX28Q9NUL7 540 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 WWOXQ9NZC7 414 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 GLTPQ9NZD2 209 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 MAT2BQ9NZL9 334 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 EIF3KQ9UBQ5 218 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 GPN3Q9UHW5 284 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 SLC24A2Q9UI40 661 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 RWDD2AQ9UIY3 292 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 SALL4Q9UJQ4 1053 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 TINAGQ9UJW2 476 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 FBXO10Q9UK96 956 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 PCOLCE2Q9UKZ9 415 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 KCNH3Q9ULD8 1083 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 RNF112Q9ULX5 631 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 PHTF1Q9UMS5 762 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 POLIQ9UNA4 740 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 GRIP1Q9Y3R0 1128 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 TRAF6Q9Y4K3 522 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 AFG3L2Q9Y4W6 797 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 GMPPBQ9Y5P6 360 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 ARHGEF5Q12774 1597 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 ARHGEF40Q8TER5 1519 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 EMSYQ7Z589 1322 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 MINK1Q8N4C8 1332 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-218ENST00000541615 SYNGAP1Q96PV0 1343 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 MLH3Q9UHC1 1453 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 TMEM82A0PJX8 343 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 LINC00862A6NCI5 91 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 OR6C74A6NCV1 312 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 CAPN8A6NHC0 703 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 FAM47DPA6NHR8 397 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 C12orf71A8MTZ7 269 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 LGALS16A8MUM7 142 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 TARM1B6A8C7 271 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 NDUFS8O00217 210 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 SH2B2O14492 632 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-218ENST00000541615 DNALI1O14645 258 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-218ENST00000541615 TOR1BO14657 336 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 PCDH17O14917 1159 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 TFECO14948 347 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-218ENST00000541615 ZBTB5O15062 677 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 TEX33O43247 280 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 EDF1O60869 148 aaKnown RBP5.28□□□□□ -1.56
SNHG1-218ENST00000541615 BCAS1O75363 584 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-218ENST00000541615 SNAPC5O75971 98 aa5.28□□□□□ -1.56
SNHG1-218ENST00000541615 ALDH1A2O94788 518 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms