RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 LIPMQ5VYY2 423 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 SLC22A25Q6T423 547 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 KLHL24Q6TFL4 600 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 ZNF782Q6ZMW2 699 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-217ENST00000541578 CAND1Q86VP6 1230 aaKnown RBP4.6□□□□□ -1.67
SNHG1-217ENST00000541578 SLC22A17Q8WUG5 538 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 OVCA2Q8WZ82 227 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 KIF1BPQ96EK5 621 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 AGXT2Q9BYV1 514 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 SLC29A3Q9BZD2 475 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 SEMA4CQ9C0C4 833 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 RMI1Q9H9A7 625 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 PLEKHA2Q9HB19 425 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 DIAPH3Q9NSV4 1193 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 RAB21Q9UL25 225 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 HSF4Q9ULV5 492 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 GABRQQ9UN88 632 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 CNPY2Q9Y2B0 182 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 PCDHB7Q9Y5E2 793 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 CLIP1P30622 1438 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 SHANK2Q9UPX8 1470 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 SIGLEC1Q9BZZ2 1709 aa4.6□□□□□ -1.67
SNHG1-217ENST00000541578 USO1O60763 962 aaKnown RBP4.59□□□□□ -1.67
SNHG1-217ENST00000541578 TMEM63AO94886 807 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 CERS1P27544 350 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 CTGFP29279 349 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 COL15A1P39059 1388 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 PBX1P40424 430 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 NUP153P49790 1475 aaKnown RBP4.59□□□□□ -1.67
SNHG1-217ENST00000541578 TIRAPP58753 221 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 SUMO2P61956 95 aaKnown RBP4.59□□□□□ -1.67
SNHG1-217ENST00000541578 TIAL1Q01085 375 aaKnown RBP eCLIP4.59□□□□□ -1.67
SNHG1-217ENST00000541578 TCOF1Q13428 1488 aaKnown RBP4.59□□□□□ -1.67
SNHG1-217ENST00000541578 MAMLD1Q13495 774 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 ERV3-1Q14264 604 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 EZH2Q15910 746 aaKnown RBP4.59□□□□□ -1.67
SNHG1-217ENST00000541578 RUNDC3AQ59EK9 446 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 ZNF484Q5JVG2 852 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 DENND2CQ68D51 928 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 ZNF772Q68DY9 489 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-217ENST00000541578 SLC9A4Q6AI14 798 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 MSANTD2Q6P1R3 559 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 TRIM72Q6ZMU5 477 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 BRINP3Q76B58 766 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 KTI12Q96EK9 354 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-217ENST00000541578 DAZAP1Q96EP5 407 aaKnown RBP4.59□□□□□ -1.67
SNHG1-217ENST00000541578 WDR24Q96S15 920 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 CD180Q99467 661 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 MACROD1Q9BQ69 325 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 THAP7Q9BT49 309 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-217ENST00000541578 MECRQ9BV79 373 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 PRXQ9BXM0 1461 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 VPS28Q9UK41 221 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 TRPC5Q9UL62 973 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-217ENST00000541578 RIMKLBQ9ULI2 386 aa4.59□□□□□ -1.67
SNHG1-217ENST00000541578 POLR1AO95602 1720 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-217ENST00000541578 ZNF142P52746 1687 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-217ENST00000541578 SAMD9Q5K651 1589 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 ARHGAP5Q13017 1502 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 COL3A1P02461 1466 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-217ENST00000541578 MBD3L5A6NJ08 208 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-217ENST00000541578 SLC38A8A6NNN8 435 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 AGPSO00116 658 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 GTPBP1O00178 669 aaKnown RBP4.58□□□□□ -1.68
SNHG1-217ENST00000541578 TNPO2O14787 897 aaKnown RBP4.58□□□□□ -1.68
SNHG1-217ENST00000541578 EXOC3O60645 756 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 VNN1O95497 513 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 STARD3NLO95772 234 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 LATS1O95835 1130 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 SCGB1D1O95968 90 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 NHLRC4P0CG21 123 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-217ENST00000541578 ACADMP11310 421 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 GGT5P36269 586 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 GPD2P43304 727 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 RAD52P43351 418 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 RBM6P78332 1123 aaKnown RBP4.58□□□□□ -1.68
SNHG1-217ENST00000541578 E2F1Q01094 437 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 CALD1Q05682 793 aaKnown RBP4.58□□□□□ -1.68
SNHG1-217ENST00000541578 CAMK1Q14012 370 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 EIF4A2Q14240 407 aaKnown RBP4.58□□□□□ -1.68
SNHG1-217ENST00000541578 ACOX1Q15067 660 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 TMTC3Q6ZXV5 915 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 RASGRP2Q7LDG7 609 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 DIS3L2Q8IYB7 885 aaKnown RBP4.58□□□□□ -1.68
SNHG1-217ENST00000541578 LINS1Q8NG48 757 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 RSPRY1Q96DX4 576 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 LENG8Q96PV6 779 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-217ENST00000541578 PPP1R10Q96QC0 940 aaKnown RBP4.58□□□□□ -1.68
SNHG1-217ENST00000541578 LMAN2LQ9H0V9 348 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 SYNCQ9H7C4 482 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 TRIM36Q9NQ86 728 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 TFCP2L1Q9NZI6 479 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 ZBTB1Q9Y2K1 713 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 PCDHA10Q9Y5I2 948 aa4.58□□□□□ -1.68
SNHG1-217ENST00000541578 KDM5CP41229 1560 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 SPAG9O60271 1321 aaKnown RBP4.57□□□□□ -1.68
SNHG1-217ENST00000541578 WDR91A4D1P6 747 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 FAM90A20PA6NIJ5 464 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 AGAP5A6NIR3 686 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 AP4M1O00189 453 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms