RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 C1orf74Q96LT6 269 aa10.9□□□□□ -0.66
ATL3-204ENST00000540699 PRICKLE1Q96MT3 831 aaPredicted RBP10.9□□□□□ -0.66
ATL3-204ENST00000540699 RUNDC3BQ96NL0 473 aa10.9□□□□□ -0.66
ATL3-204ENST00000540699 KCTD15Q96SI1 283 aaPredicted RBP10.9□□□□□ -0.66
ATL3-204ENST00000540699 BBS2Q9BXC9 721 aa10.9□□□□□ -0.66
ATL3-204ENST00000540699 WDCPQ9H6R7 721 aa10.9□□□□□ -0.66
ATL3-204ENST00000540699 LTB4R2Q9NPC1 389 aa10.9□□□□□ -0.66
ATL3-204ENST00000540699 GDF3Q9NR23 364 aa10.9□□□□□ -0.66
ATL3-204ENST00000540699 AMACRQ9UHK6 382 aa10.9□□□□□ -0.66
ATL3-204ENST00000540699 SLC12A6Q9UHW9 1150 aa10.9□□□□□ -0.66
ATL3-204ENST00000540699 MRPS17Q9Y2R5 130 aaKnown RBP10.9□□□□□ -0.66
ATL3-204ENST00000540699 OTOGLQ3ZCN5 2332 aa10.9□□□□□ -0.67
ATL3-204ENST00000540699 SYNJ2BP-COX16A0A087WUM0 186 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 GOLGA6L7A0A1B0GV03 622 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 FAM187AA6NFU0 413 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.89□□□□□ -0.67
ATL3-204ENST00000540699 NEDD8-MDP1E9PL57 170 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 TTI1O43156 1089 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 TULP3O75386 442 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 PAGE1O75459 146 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 MOCS2O96007 188 aaPredicted RBP10.89□□□□□ -0.67
ATL3-204ENST00000540699 CYBBP04839 570 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 CISD3P0C7P0 127 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 CHRM1P11229 460 aaPredicted RBP10.89□□□□□ -0.67
ATL3-204ENST00000540699 CHRNB1P11230 501 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 TYRP14679 529 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 TACR2P21452 398 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 CD72P21854 359 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 HOXD9P28356 352 aaPredicted RBP10.89□□□□□ -0.67
ATL3-204ENST00000540699 ADRA1BP35368 520 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 GALK1P51570 392 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 SLC7A5Q01650 507 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 NRG1Q02297 640 aaPredicted RBP10.89□□□□□ -0.67
ATL3-204ENST00000540699 SEMA3BQ13214 749 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 CCINQ13939 588 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 BRD3Q15059 726 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 ODF2Q5BJF6 829 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 NAIF1Q69YI7 327 aaPredicted RBP10.89□□□□□ -0.67
ATL3-204ENST00000540699 SLC9A4Q6AI14 798 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 FSTL4Q6MZW2 842 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 CCDC137Q6PK04 289 aaKnown RBP10.89□□□□□ -0.67
ATL3-204ENST00000540699 MAATS1Q7Z4T9 603 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 C12orf40Q86WS4 652 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 MAP7D3Q8IWC1 876 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 ZNF683Q8IZ20 524 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 PQLC3Q8N755 202 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 CCDC26Q8TAB7 109 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 ATG4AQ8WYN0 398 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 EZH1Q92800 747 aaPredicted RBP10.89□□□□□ -0.67
ATL3-204ENST00000540699 RNF34Q969K3 372 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 EXOC4Q96A65 974 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 MYEOVQ96EZ4 313 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 RNF157Q96PX1 679 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 HAPLN3Q96S86 360 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 P2RY13Q9BPV8 354 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 SLC2A11Q9BYW1 496 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 MAGEB5Q9BZ81 275 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 FOXQ1Q9C009 403 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 TKTL2Q9H0I9 626 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 FBRSL1Q9HCM7 1045 aaKnown RBP10.89□□□□□ -0.67
ATL3-204ENST00000540699 HOMER3Q9NSC5 361 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 COX16Q9P0S2 106 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 DLGAP2Q9P1A6 1054 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 RCOR3Q9P2K3 495 aaPredicted RBP10.89□□□□□ -0.67
ATL3-204ENST00000540699 SLC27A6Q9Y2P4 619 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 MTF2Q9Y483 593 aaPredicted RBP10.89□□□□□ -0.67
ATL3-204ENST00000540699 HS3ST4Q9Y661 456 aa10.89□□□□□ -0.67
ATL3-204ENST00000540699 MUC22E2RYF6 1773 aaPredicted RBP10.88□□□□□ -0.67
ATL3-204ENST00000540699 IGLV3-10A0A075B6K4 115 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 CCDC151A5D8V7 595 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 ZSCAN5CA6NGD5 496 aaPredicted RBP10.88□□□□□ -0.67
ATL3-204ENST00000540699 FAM170BA6NMN3 283 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 APOC4-APOC2K7ER74 178 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 LIASO43766 372 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 CST8O60676 142 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 APOC2P02655 101 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 DRD1P21728 446 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 MCM3P25205 808 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 MAGEA9P43362 315 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 RPS9P46781 194 aaKnown RBP10.88□□□□□ -0.67
ATL3-204ENST00000540699 KCNJ1P48048 391 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 SLC6A11P48066 632 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 SGSHP51688 502 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 CLCN6P51797 869 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 DR1Q01658 176 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 MESP2Q0VG99 397 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 AUHQ13825 339 aaKnown RBP10.88□□□□□ -0.67
ATL3-204ENST00000540699 KRT81Q14533 505 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 PON2Q15165 354 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 OASLQ15646 514 aaKnown RBP10.88□□□□□ -0.67
ATL3-204ENST00000540699 ANO4Q32M45 955 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 ANKRD20A8PQ5CZ79 823 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 DGKKQ5KSL6 1271 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 TTC39BQ5VTQ0 682 aaPredicted RBP10.88□□□□□ -0.67
ATL3-204ENST00000540699 RAP1GAP2Q684P5 730 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 RFWD3Q6PCD5 774 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 TPGS1Q6ZTW0 290 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 KIAA0907Q7Z7F0 614 aaPredicted RBP10.88□□□□□ -0.67
ATL3-204ENST00000540699 CHSY1Q86X52 802 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 JAMLQ86YT9 394 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms