RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 CBWD1Q9BRT8 395 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 XPNPEP3Q9NQH7 507 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 DDX4Q9NQI0 724 aaKnown RBP11.28□□□□□ -0.6
PBX1-212ENST00000540236 FAM49BQ9NUQ9 324 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 CEMIPQ8WUJ3 1361 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 USP32Q8NFA0 1604 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 ATP6V1G2-DDX39BF2Z307 99 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 TFAP2AP05549 437 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 SAMD3Q8N6K7 520 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 JPH3Q8WXH2 748 aaPredicted RBP11.28□□□□□ -0.6
PBX1-212ENST00000540236 IRGQQ8WZA9 623 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 LPGAT1Q92604 370 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 SLC35C1Q96A29 364 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 MTMR12Q9C0I1 747 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 AAASQ9NRG9 546 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 TCRBV5S4A2TA0A5A2 114 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 SIGLEC16A6NMB1 481 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 HLA-DOAP06340 250 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 CCT8P50990 548 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 CPXCR1Q8N123 301 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 ZNF781Q8N8C0 355 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 XXYLT1Q8NBI6 393 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 OTULINQ96BN8 352 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 GDAP2Q9NXN4 497 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 GMIPQ9P107 970 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 MRPS7Q9Y2R9 242 aaKnown RBP11.28□□□□□ -0.6
PBX1-212ENST00000540236 FAM25AB3EWG3 89 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 FAM25CB3EWG5 89 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 FAM25GB3EWG6 89 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 SERPINE1P05121 402 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 DLDP09622 509 aaKnown RBP11.28□□□□□ -0.6
PBX1-212ENST00000540236 PLK1P53350 603 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 GDF10P55107 478 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 RHBDL3P58872 404 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 IL18R1Q13478 541 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 MCFD2Q8NI22 146 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 PIK3R3Q92569 461 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 ASIC4Q96FT7 647 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 MOV10Q9HCE1 1003 aaKnown RBP11.28□□□□□ -0.6
PBX1-212ENST00000540236 TBC1D22BQ9NU19 505 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 F8VP50 259 aa11.27□□□□□ -0.6
PBX1-212ENST00000540236 ITIH1P19827 911 aa11.27□□□□□ -0.6
PBX1-212ENST00000540236 SCNN1DP51172 638 aa11.27□□□□□ -0.6
PBX1-212ENST00000540236 ZHX1-C8orf76Q96EF9 292 aa11.27□□□□□ -0.6
PBX1-212ENST00000540236 SOCS2O14508 198 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 NRP1O14786 923 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 NDUFS2O75306 463 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 BLVRAP53004 296 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 APOL2Q9BQE5 337 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 RTKNQ9BST9 563 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 CPSF3Q9UKF6 684 aaKnown RBP11.27□□□□□ -0.61
PBX1-212ENST00000540236 ZCCHC11Q5TAX3 1644 aaKnown RBP11.27□□□□□ -0.61
PBX1-212ENST00000540236 BMXP51813 675 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 ARHGDIAP52565 204 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 C1QBPQ07021 282 aaKnown RBP11.27□□□□□ -0.61
PBX1-212ENST00000540236 NANOGP8Q6NSW7 305 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 FAM20CQ8IXL6 584 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 FBXL16Q8N461 479 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 DNAJB14Q8TBM8 379 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.27□□□□□ -0.61
PBX1-212ENST00000540236 KLHL3Q9UH77 587 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 PNPLA7Q6ZV29 1317 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 H0YJX3 145 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 MRASO14807 208 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 B4GAT1O43505 415 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 GLRA3O75311 464 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 PGRP06401 933 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 MAPK12P53778 367 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 KLF1Q13351 362 aaPredicted RBP11.27□□□□□ -0.61
PBX1-212ENST00000540236 CLEC16AQ2KHT3 1053 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 MSS51Q4VC12 460 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 ANGPTL8Q6UXH0 198 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 GPR180Q86V85 440 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 UNC45BQ8IWX7 931 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 ALLCQ8N6M5 410 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 FEZF2Q8TBJ5 459 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 HEXIM2Q96MH2 286 aaKnown RBP11.27□□□□□ -0.61
PBX1-212ENST00000540236 RPF2Q9H7B2 306 aaKnown RBP11.27□□□□□ -0.61
PBX1-212ENST00000540236 ROBO2Q9HCK4 1378 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 SESN1Q9Y6P5 492 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 U3KQV3 271 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 CLPXO76031 633 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 RECQL5O94762 991 aaPredicted RBP11.27□□□□□ -0.61
PBX1-212ENST00000540236 IDO1P14902 403 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 GNG2P59768 71 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 MGAT5BQ3V5L5 792 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 RNASE12Q5GAN4 147 aaKnown RBP11.27□□□□□ -0.61
PBX1-212ENST00000540236 SLC38A6Q8IZM9 456 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 NATD1Q8N6N6 113 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 TUBGCP3Q96CW5 907 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 VMP1Q96GC9 406 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 ALPK1Q96QP1 1244 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 CDADC1Q9BWV3 514 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 SCN3BQ9NY72 215 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 VPS4AQ9UN37 437 aa11.27□□□□□ -0.61
PBX1-212ENST00000540236 PSKH1P11801 424 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 HPCAL1P37235 193 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 MMRN1Q13201 1228 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 GTF2H3Q13889 308 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 BTBD16Q32M84 506 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms