RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 GNA12Q03113 381 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 C2orf54Q08AI8 447 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 GALNT2Q10471 571 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 POLD3Q15054 466 aaPredicted RBP19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 ASTLQ6HA08 431 aaPredicted RBP19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 TTC27Q6P3X3 843 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 ARHGAP36Q6ZRI8 547 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 TRIM67Q6ZTA4 783 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CPA6Q8N4T0 437 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CEP112Q8N8E3 955 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 NAT16Q8N8M0 369 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 C12orf50Q8NA57 414 aaPredicted RBP19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 OR7D4Q8NG98 312 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 MAGOHBQ96A72 148 aaKnown RBP19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 HMCESQ96FZ2 354 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 DDX47Q9H0S4 455 aaKnown RBP19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 C10orf88Q9H8K7 445 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 RAD54BQ9Y620 910 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CCDC188H7C350 402 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 MCF2LO15068 1137 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CACNG3O60359 315 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 PHF2O75151 1096 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 RBP3P10745 1247 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 MZF1P28698 734 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 ACVRL1P37023 503 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 KCNJ1P48048 391 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 PAPOLAP51003 745 aaKnown RBP19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 LMAN2Q12907 356 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 PARP15Q460N3 678 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 RNF219Q5W0B1 726 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 BZW1Q7L1Q6 419 aaKnown RBP19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 C12orf40Q86WS4 652 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CCDC117Q8IWD4 279 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 ARHGEF2Q92974 986 aaKnown RBP19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 NKD2Q969F2 451 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 ALG14Q96F25 216 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 LMLNQ96KR4 655 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 LGMNQ99538 433 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 FRMD8P1Q9BZ68 369 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 MAGEH1Q9H213 219 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 HOMER3Q9NSC5 361 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 FBXO10Q9UK96 956 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 SORCS3Q9UPU3 1222 aa19.37■□□□□ 0.69
TNFRSF1A-213ENST00000540022 KIF26AQ9ULI4 1882 aaPredicted RBP19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 MUC6Q6W4X9 2439 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CTAGE15A4D2H0 777 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 H7C0C1 242 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 TRIM24O15164 1050 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 NCAM2O15394 837 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CTAGE8P0CG41 777 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 MX2P20592 715 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 HLA-FP30511 346 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CD70P32970 193 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CSKP41240 450 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 GARSP41250 739 aaKnown RBP19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 ATP5OP48047 213 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 SIGLEC14Q08ET2 396 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 NR1H3Q13133 447 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 XRCC4Q13426 336 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 BYSLQ13895 437 aaKnown RBP19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 PDK1Q15118 436 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 OASLQ15646 514 aaKnown RBP19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 IER5LQ5T953 404 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 DRICH1Q6PGQ1 229 aaPredicted RBP19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CTAGE6Q86UF2 777 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CTAGE4Q8IX94 777 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 KLHL7Q8IXQ5 586 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 ETFBKMTQ8IXQ9 262 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 LRRN4CLQ8ND94 238 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 MNS1Q8NEH6 495 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 SLC2A11Q9BYW1 496 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 MUC3BQ9H195 1237 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 ABCB8Q9NUT2 735 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 KIAA1522Q9P206 1035 aaPredicted RBP19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 OR51B4Q9Y5P0 310 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 KMT2EQ8IZD2 1858 aa19.36■□□□□ 0.69
TNFRSF1A-213ENST00000540022 TMEM221A6NGB7 291 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 ARHGAP42A6NI28 874 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 M0R296 226 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 GJA4P35212 333 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 COILP38432 576 aaPredicted RBP19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 SERINC3Q13530 473 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 ITPRIPL2Q3MIP1 535 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 ZNF783Q6ZMS7 281 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CCNYQ8ND76 341 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 HDAC11Q96DB2 347 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CHFRQ96EP1 664 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 XPO6Q96QU8 1125 aaKnown RBP19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 FEM1AQ9BSK4 669 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 SPON2Q9BUD6 331 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 DNAJC17Q9NVM6 304 aaKnown RBP19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 PPP1R12AO14974 1030 aaPredicted RBP19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 MAFKO60675 156 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 TULP3O75386 442 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CISD3P0C7P0 127 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CHRNA3P32297 505 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 SLC6A11P48066 632 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 PPIDQ08752 370 aaKnown RBP19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 TDGQ13569 410 aa19.35■□□□□ 0.69
TNFRSF1A-213ENST00000540022 PRKD1Q15139 912 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms