RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ZBTB6Q15916 424 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 AGKQ53H12 422 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 SGO1Q5FBB7 561 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 IRGCQ6NXR0 463 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 ZBTB49Q6ZSB9 765 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 TDRD5Q8NAT2 981 aaKnown RBP10.19□□□□□ -0.78
TRAF1-202ENST00000540010 ARRDC4Q8NCT1 418 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 PIWIL1Q96J94 861 aaKnown RBP10.19□□□□□ -0.78
TRAF1-202ENST00000540010 GLT1D1Q96MS3 346 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 SIP14410 1827 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 PIRO00625 290 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 EDF1O60869 148 aaKnown RBP10.18□□□□□ -0.78
TRAF1-202ENST00000540010 B3GAT3O94766 335 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 ETS2P15036 469 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 MSX2P35548 267 aaPredicted RBP10.18□□□□□ -0.78
TRAF1-202ENST00000540010 HDAC4P56524 1084 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 ANKS1BQ7Z6G8 1248 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 DTNBP1Q96EV8 351 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 CELF6Q96J87 481 aaKnown RBP10.18□□□□□ -0.78
TRAF1-202ENST00000540010 VPS50Q96JG6 964 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 WDCPQ9H6R7 721 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.18□□□□□ -0.78
TRAF1-202ENST00000540010 ACOT9Q9Y305 439 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 TCRBV5S1A1TA0A578 114 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 C2CD4BA6NLJ0 364 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 MEIS3P2A8K0S8 358 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 FAM155AB1AL88 458 aaPredicted RBP10.18□□□□□ -0.78
TRAF1-202ENST00000540010 APOC4-APOC2K7ER74 178 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 CLDN5O00501 218 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 TSPAN3O60637 253 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 APOC2P02655 101 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 FGFR1P11362 822 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 FDFT1P37268 417 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 SLC25A11Q02978 314 aaKnown RBP10.18□□□□□ -0.78
TRAF1-202ENST00000540010 MGAT5Q09328 741 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 CSHL1Q14406 222 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 POU6F1Q14863 301 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 ALYREFQ86V81 257 aaKnown RBP10.18□□□□□ -0.78
TRAF1-202ENST00000540010 SNX32Q86XE0 403 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 KYQ8NBH2 561 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 HASPINQ8TF76 798 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 SNX19Q92543 992 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 SLCO2A1Q92959 643 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 MPP4Q96JB8 637 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 TSPAN18Q96SJ8 248 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 ADAM2Q99965 735 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 NAT9Q9BTE0 207 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 PADI3Q9ULW8 664 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 A0A096LPK6 155 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 KDM1AO60341 852 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 RPLP2P05387 115 aaKnown RBP10.18□□□□□ -0.78
TRAF1-202ENST00000540010 FAM200BP0CF97 657 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 PTPN1P18031 435 aaKnown RBP10.18□□□□□ -0.78
TRAF1-202ENST00000540010 GABRB2P47870 512 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 ADIGQ0VDE8 80 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 DEFB115Q30KQ5 88 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 ZDHHC17Q8IUH5 632 aa10.18□□□□□ -0.78
TRAF1-202ENST00000540010 SUPT3HB4E1H0 165 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 PAPSS1O43252 624 aaPredicted RBP10.17□□□□□ -0.78
TRAF1-202ENST00000540010 ERVK-10P10266 1014 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 HMOX2P30519 316 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 MAP3K7CLP57077 242 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 NRF1Q16656 503 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 SMYD5Q6GMV2 418 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 TOP6BLQ8N6T0 577 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 PIWIL2Q8TC59 973 aaKnown RBP10.17□□□□□ -0.78
TRAF1-202ENST00000540010 CAPNS2Q96L46 248 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 FRMD8P1Q9BZ68 369 aaPredicted RBP10.17□□□□□ -0.78
TRAF1-202ENST00000540010 COPS7BQ9H9Q2 264 aaPredicted RBP10.17□□□□□ -0.78
TRAF1-202ENST00000540010 LATS2Q9NRM7 1088 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 LRFN2Q9ULH4 789 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 PAIP2BQ9ULR5 123 aaKnown RBP10.17□□□□□ -0.78
TRAF1-202ENST00000540010 NCF1BA6NI72 391 aaPredicted RBP10.17□□□□□ -0.78
TRAF1-202ENST00000540010 SAC3D1A6NKF1 404 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 NCF1CA8MVU1 366 aaPredicted RBP10.17□□□□□ -0.78
TRAF1-202ENST00000540010 TIMM44O43615 452 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 NDUFS3O75489 264 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 SERPINE1P05121 402 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 NCF1P14598 390 aaPredicted RBP10.17□□□□□ -0.78
TRAF1-202ENST00000540010 ZNF23P17027 643 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 ITGA7Q13683 1181 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 ALKAL1Q6UXT8 129 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 BBS12Q6ZW61 710 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 PIGZQ86VD9 579 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 UNC45BQ8IWX7 931 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 ALLCQ8N6M5 410 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 CLEC4CQ8WTT0 213 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 SEMA6AQ9H2E6 1030 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 CCDC167Q9P0B6 97 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 KIF17Q9P2E2 1029 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 MCM8Q9UJA3 840 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 PHGDHO43175 533 aaKnown RBP10.17□□□□□ -0.78
TRAF1-202ENST00000540010 TRIM13O60858 407 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 SERPINB8P50452 374 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 CLCNKBP51801 687 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 UBAP2LQ14157 1087 aaKnown RBP10.17□□□□□ -0.78
TRAF1-202ENST00000540010 ARHGAP17Q68EM7 881 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 C4orf22Q6V702 233 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 CD99L2Q8TCZ2 262 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 SLC35F5Q8WV83 523 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms