RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 MIEF2Q96C03 454 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 LRRC39Q96DD0 335 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 SERPINB12Q96P63 405 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 CCDC77Q9BR77 488 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 KLF16Q9BXK1 252 aaPredicted RBP17.28■□□□□ 0.36
COPS3-212ENST00000539941 SLC39A8Q9C0K1 460 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 ZNF334Q9HCZ1 680 aaPredicted RBP17.28■□□□□ 0.36
COPS3-212ENST00000539941 H0YHG0 523 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 KCNK1O00180 336 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 DFFAO00273 331 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 LATS1O95835 1130 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 OLFM2O95897 454 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 SPATA31D3P0C874 917 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 MLNP12872 115 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 PFKLP17858 780 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 IFI35P80217 286 aaPredicted RBP17.27■□□□□ 0.36
COPS3-212ENST00000539941 GAD2Q05329 585 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 CCDC38Q502W7 563 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 PLPP4Q5VZY2 271 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 NADSYN1Q6IA69 706 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 SPATA31D4Q6ZUB0 917 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 PID1Q7Z2X4 250 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 ATP11CQ8NB49 1132 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 PYROXD1Q8WU10 500 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 PGM2Q96G03 612 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 RPRD1AQ96P16 312 aaPredicted RBP17.27■□□□□ 0.36
COPS3-212ENST00000539941 DDX50Q9BQ39 737 aaKnown RBP17.27■□□□□ 0.36
COPS3-212ENST00000539941 CAPS2Q9BXY5 557 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 PPCSQ9HAB8 311 aa17.27■□□□□ 0.36
COPS3-212ENST00000539941 OBSL1O75147 1896 aa17.27■□□□□ 0.35
COPS3-212ENST00000539941 C2orf78A6NCI8 922 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 SRRM3A6NNA2 597 aaPredicted RBP17.26■□□□□ 0.35
COPS3-212ENST00000539941 ERI2A8K979 691 aaKnown RBP17.26■□□□□ 0.35
COPS3-212ENST00000539941 RASGRF2O14827 1237 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 MAFKO60675 156 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 STC2O76061 302 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 CDC25CP30307 473 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 PHBP35232 272 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 MAGEA3P43357 314 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 FASTKD3Q14CZ7 662 aaKnown RBP17.26■□□□□ 0.35
COPS3-212ENST00000539941 C11orf91Q3C1V1 193 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 BBS9Q3SYG4 887 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 UBAP2Q5T6F2 1119 aaKnown RBP17.26■□□□□ 0.35
COPS3-212ENST00000539941 FAM109BQ6ICB4 259 aaPredicted RBP17.26■□□□□ 0.35
COPS3-212ENST00000539941 PDE12Q6L8Q7 609 aaKnown RBP17.26■□□□□ 0.35
COPS3-212ENST00000539941 OTUD6BQ8N6M0 293 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 IGSF8Q969P0 613 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 TEKT5Q96M29 485 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 C17orf80Q9BSJ5 609 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 RNF38Q9H0F5 515 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 STMN4Q9H169 189 aaPredicted RBP17.26■□□□□ 0.35
COPS3-212ENST00000539941 GBA3Q9H227 469 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 LRRC4CQ9HCJ2 640 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 ZNF212Q9UDV6 495 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 MTCL1Q9Y4B5 1905 aaKnown RBP17.26■□□□□ 0.35
COPS3-212ENST00000539941 ARHGAP42A6NI28 874 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 HIDE1A8MVS5 230 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 MATN3O15232 486 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 SPAG6O75602 509 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 DNAJB1P25685 340 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 PSMB4P28070 264 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 YBEYP58557 167 aaPredicted RBP17.26■□□□□ 0.35
COPS3-212ENST00000539941 ANO4Q32M45 955 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 MSS51Q4VC12 460 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 ALFQ53S48 1182 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 FAM133BQ5BKY9 247 aaKnown RBP17.26■□□□□ 0.35
COPS3-212ENST00000539941 RABGAP1LQ5R372 815 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 WLSQ5T9L3 541 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 TMC8Q8IU68 726 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 ZSCAN18Q8TBC5 510 aaPredicted RBP17.26■□□□□ 0.35
COPS3-212ENST00000539941 MRPS31Q92665 395 aaKnown RBP17.26■□□□□ 0.35
COPS3-212ENST00000539941 PPP1R2P1Q96PQ5 205 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 LRRC3Q9BY71 257 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 NDFIP2Q9NV92 336 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 STOML2Q9UJZ1 356 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 TEX264Q9Y6I9 313 aa17.26■□□□□ 0.35
COPS3-212ENST00000539941 SHROOM3Q8TF72 1996 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 CNTN5O94779 1100 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 FGF19O95750 216 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 MBL2P11226 248 aaPredicted RBP17.25■□□□□ 0.35
COPS3-212ENST00000539941 CCNB1P14635 433 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 PAPOLAP51003 745 aaKnown RBP17.25■□□□□ 0.35
COPS3-212ENST00000539941 CLCN4P51793 760 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 SKOR1P84550 965 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 ZBTB17Q13105 803 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 ZKSCAN8Q15776 578 aaPredicted RBP17.25■□□□□ 0.35
COPS3-212ENST00000539941 PARP15Q460N3 678 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 PPM1LQ5SGD2 360 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 TAX1BP1Q86VP1 789 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 CAND1Q86VP6 1230 aaKnown RBP17.25■□□□□ 0.35
COPS3-212ENST00000539941 LGI2Q8N0V4 545 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 FBXO36Q8NEA4 188 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 UHMK1Q8TAS1 419 aaKnown RBP17.25■□□□□ 0.35
COPS3-212ENST00000539941 DEPDC1BQ8WUY9 529 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 GCNAQ96QF7 691 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 IL12RB2Q99665 862 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 CENPHQ9H3R5 247 aa17.25■□□□□ 0.35
COPS3-212ENST00000539941 NOL6Q9H6R4 1146 aaKnown RBP17.25■□□□□ 0.35
COPS3-212ENST00000539941 MYO18AQ92614 2054 aaKnown RBP17.24■□□□□ 0.35
COPS3-212ENST00000539941 DENND4CQ5VZ89 1909 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms