RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 DEUP1Q05D60 604 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 TYRO3Q06418 890 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 SULT2A1Q06520 285 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 ZNF177Q13360 481 aaPredicted RBP17.25■□□□□ 0.35
DDB1-215ENST00000539712 AADATQ8N5Z0 425 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 EMC1Q8N766 993 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 PSMB7Q99436 277 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 NEUROG2Q9H2A3 272 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 IL21RQ9HBE5 538 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 ADAMTS1Q9UHI8 967 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 DAAM1Q9Y4D1 1078 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 CABIN1Q9Y6J0 2220 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 A0A1W2PP55 124 aa17.24■□□□□ 0.35
DDB1-215ENST00000539712 STAT1P42224 750 aa17.24■□□□□ 0.35
DDB1-215ENST00000539712 CSNK1EP49674 416 aaKnown RBP17.24■□□□□ 0.35
DDB1-215ENST00000539712 METAP1P53582 386 aa17.24■□□□□ 0.35
DDB1-215ENST00000539712 UBXN1Q04323 297 aa17.24■□□□□ 0.35
DDB1-215ENST00000539712 ZNF252P-AS1Q0IIN9 211 aa17.24■□□□□ 0.35
DDB1-215ENST00000539712 TTC31Q49AM3 519 aaPredicted RBP17.24■□□□□ 0.35
DDB1-215ENST00000539712 RNF219Q5W0B1 726 aaPredicted RBP17.24■□□□□ 0.35
DDB1-215ENST00000539712 PHLDB2Q86SQ0 1253 aa17.24■□□□□ 0.35
DDB1-215ENST00000539712 FAM131CQ96AQ9 280 aa17.24■□□□□ 0.35
DDB1-215ENST00000539712 ZDHHC5Q9C0B5 715 aa17.24■□□□□ 0.35
DDB1-215ENST00000539712 EBF2Q9HAK2 575 aa17.24■□□□□ 0.35
DDB1-215ENST00000539712 OSGEPQ9NPF4 335 aa17.24■□□□□ 0.35
DDB1-215ENST00000539712 MPP6Q9NZW5 540 aa17.24■□□□□ 0.35
DDB1-215ENST00000539712 ANGPTL2Q9UKU9 493 aa17.24■□□□□ 0.35
DDB1-215ENST00000539712 SARDHQ9UL12 918 aa17.24■□□□□ 0.35
DDB1-215ENST00000539712 FREM2Q5SZK8 3169 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 DMXL2Q8TDJ6 3036 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 RNASEH1O60930 286 aaKnown RBP17.23■□□□□ 0.35
DDB1-215ENST00000539712 GJB6O95452 261 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 TOP3BO95985 862 aaKnown RBP17.23■□□□□ 0.35
DDB1-215ENST00000539712 MT-CO1P00395 513 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 TPM2P07951 284 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 CD27P26842 260 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 SLC14A1Q13336 389 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 ELAVL3Q14576 367 aaKnown RBP17.23■□□□□ 0.35
DDB1-215ENST00000539712 CCDC14Q49A88 953 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 KCNT1Q5JUK3 1230 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 SND1Q7KZF4 910 aaKnown RBP eCLIP17.23■□□□□ 0.351e-6■■■□□ 16.2
DDB1-215ENST00000539712 FAM131BQ86XD5 332 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 HDDC3Q8N4P3 179 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 JOSD2Q8TAC2 188 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 CAMK1GQ96NX5 476 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 HAPLN3Q96S86 360 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 TM9SF3Q9HD45 589 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 METTL5Q9NRN9 209 aaKnown RBP17.23■□□□□ 0.35
DDB1-215ENST00000539712 TMEM51Q9NW97 253 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 VPS28Q9UK41 221 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 FZD4Q9ULV1 537 aa17.23■□□□□ 0.35
DDB1-215ENST00000539712 CACNA1BQ00975 2339 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 A0A0D9SEW6 157 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 SPAARA0A1B0GVQ0 90 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 A0A1B0GVT2 93 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 C2CD4BA6NLJ0 364 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 E9PAM4 449 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 TEX33O43247 280 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 SNAP91O60641 907 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 FSBPO95073 299 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 GOT1P17174 413 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 RDXP35241 583 aaKnown RBP17.22■□□□□ 0.35
DDB1-215ENST00000539712 DRD3P35462 400 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 PSMD8P48556 350 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 AFF3P51826 1226 aaKnown RBP17.22■□□□□ 0.35
DDB1-215ENST00000539712 DLG2Q15700 870 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 CLEC16AQ2KHT3 1053 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 C15orf59Q2T9L4 293 aaPredicted RBP17.22■□□□□ 0.35
DDB1-215ENST00000539712 KIF19Q2TAC6 998 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 HLA-BQ31612 363 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 KIAA0895LQ68EN5 471 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 NCEH1Q6PIU2 408 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 TRIM72Q6ZMU5 477 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 SH2D3CQ8N5H7 860 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 AOPEPQ8N6M6 819 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 MSANTD4Q8NCY6 345 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 NEK11Q8NG66 645 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 RXFP2Q8WXD0 754 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 SNX19Q92543 992 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 CENPIQ92674 756 aaPredicted RBP17.22■□□□□ 0.35
DDB1-215ENST00000539712 SPAG5Q96R06 1193 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 PPP1R9BQ96SB3 815 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 C11orf70Q9BRQ4 267 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 MAGEB5Q9BZ81 275 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 PPM1HQ9ULR3 514 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 HS3ST2Q9Y278 367 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 NCKAP1Q9Y2A7 1128 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 FNDC3AQ9Y2H6 1198 aaKnown RBP17.22■□□□□ 0.35
DDB1-215ENST00000539712 PAXBP1Q9Y5B6 917 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 NYNRINQ9P2P1 1898 aaKnown RBP17.22■□□□□ 0.35
DDB1-215ENST00000539712 DOCK4Q8N1I0 1966 aa17.22■□□□□ 0.35
DDB1-215ENST00000539712 CFAP47Q6ZTR5 3102 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 IGF2RP11717 2491 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 TCRBV5S1A1TA0A578 114 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 K7ERQ8 282 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 SH3BP5O60239 455 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 RNASEH2AO75792 299 aaKnown RBP17.21■□□□□ 0.35
DDB1-215ENST00000539712 CDK11BP21127 795 aaKnown RBP17.21■□□□□ 0.35
DDB1-215ENST00000539712 C5AR1P21730 350 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 NNMTP40261 264 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms