RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 SNX16P57768 344 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 ABCE1P61221 599 aaKnown RBP14.37□□□□□ -0.11
UBE3B-210ENST00000539599 SV2CQ496J9 727 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 TNIP3Q96KP6 325 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 SENP8Q96LD8 212 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 TMEM209Q96SK2 561 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 COG4Q9H9E3 785 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 STK10O94804 968 aaKnown RBP14.37□□□□□ -0.11
UBE3B-210ENST00000539599 LMNAP02545 664 aaKnown RBP14.37□□□□□ -0.11
UBE3B-210ENST00000539599 GSTA2P09210 222 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 SERPINB5P36952 375 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 KLC1Q07866 573 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 CUL3Q13618 768 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 GRB14Q14449 540 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 ANKRD20A4Q4UJ75 823 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 NOMO2Q5JPE7 1267 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 TMEM198Q66K66 360 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 ARCQ7LC44 396 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 LMNTD2Q8IXW0 634 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 NT5C3BQ969T7 300 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 RBBP8Q99708 897 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 APBA2Q99767 749 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 TKTL2Q9H0I9 626 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 MYADML2A6NDP7 307 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 HACD1B0YJ81 288 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 PPP1R12AO14974 1030 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-210ENST00000539599 C2P06681 752 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 FAM200BP0CF97 657 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 DAOAP59103 153 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 RWDD4Q6NW29 188 aaKnown RBP14.36□□□□□ -0.11
UBE3B-210ENST00000539599 RPS27LQ71UM5 84 aaKnown RBP14.36□□□□□ -0.11
UBE3B-210ENST00000539599 DENND6AQ8IWF6 608 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 DEFB107AQ8IZN7 70 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 RNF148Q8N7C7 305 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.36□□□□□ -0.11
UBE3B-210ENST00000539599 SLC26A7Q8TE54 656 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 SGF29Q96ES7 293 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 FTHL17Q9BXU8 183 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 NDFIP2Q9NV92 336 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 CORO1CQ9ULV4 474 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-210ENST00000539599 RALGAPA2Q2PPJ7 1873 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 ZNF487B1APH4 448 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 G3V2L1 256 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 DFFAO00273 331 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 MAGEC1O60732 1142 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 CIB2O75838 187 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 LRIG2O94898 1065 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 LUC7L3O95232 432 aaKnown RBP14.36□□□□□ -0.11
UBE3B-210ENST00000539599 MYCNP04198 464 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-210ENST00000539599 MLNP12872 115 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 SP100P23497 879 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-210ENST00000539599 EPHA3P29320 983 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 ACTR3P61158 418 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 GRM3Q14832 879 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 POU6F1Q14863 301 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 PAFAH1B3Q15102 231 aaKnown RBP14.36□□□□□ -0.11
UBE3B-210ENST00000539599 IL31Q6EBC2 164 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 FAM35AQ86V20 835 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 PSTKQ8IV42 348 aaKnown RBP14.36□□□□□ -0.11
UBE3B-210ENST00000539599 SCAMP5Q8TAC9 235 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 OMDQ99983 421 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 STAP1Q9ULZ2 295 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 SOX13Q9UN79 622 aa14.36□□□□□ -0.11
UBE3B-210ENST00000539599 SMIM35A0A1B0GVV1 85 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 TMEM233B4DJY2 109 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 HSPA4LO95757 839 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 CYP2B6P20813 491 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 MPP1Q00013 466 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 CBLBQ13191 982 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 CTBP1Q13363 440 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 FOXB2Q5VYV0 432 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 FAM91A1Q658Y4 838 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 KCNMB4Q86W47 210 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 MYLK4Q86YV6 388 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-210ENST00000539599 CCNJLQ8IV13 435 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 CNTD1Q8N815 330 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 PPP4R1Q8TF05 950 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 SLC2A13Q96QE2 648 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 MMADHCQ9H3L0 296 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-210ENST00000539599 SLC2A6Q9UGQ3 507 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 DCDC2Q9UHG0 476 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 MTF2Q9Y483 593 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-210ENST00000539599 MBLAC1A4D2B0 266 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-210ENST00000539599 RRN3P2A6NIE6 340 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 MAP3K7O43318 606 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 MSI1O43347 362 aaKnown RBP14.35□□□□□ -0.11
UBE3B-210ENST00000539599 AP2A1O95782 977 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 HOXD8P13378 290 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-210ENST00000539599 AOC1P19801 751 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 PSEN2P49810 448 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 SCNN1GP51170 649 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 BNIPLQ7Z465 357 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 PLEKHH3Q7Z736 793 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 SNX31Q8N9S9 440 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 RNF34Q969K3 372 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 TSPYL2Q9H2G4 693 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-210ENST00000539599 IGSF9Q9P2J2 1179 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 OR12D3Q9UGF7 316 aa14.35□□□□□ -0.11
UBE3B-210ENST00000539599 GNEQ9Y223 722 aaKnown RBP14.35□□□□□ -0.11
UBE3B-210ENST00000539599 FIS1Q9Y3D6 152 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms