RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 TXNDC9O14530 226 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 XPO1O14980 1071 aaKnown RBP13.52□□□□□ -0.24
UBE3B-209ENST00000539584 PSMD3O43242 534 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 KLHL41O60662 606 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 DNAJA2O60884 412 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 CD4P01730 458 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 C2P06681 752 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 SERPINB5P36952 375 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 PNPLA4P41247 253 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 SULT1E1P49888 294 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 CSRP3P50461 194 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 NUDT2P50583 147 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 USP4Q13107 963 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 MPP3Q13368 585 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 ANO4Q32M45 955 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 ITPRIPL1Q6GPH6 555 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 TICAM1Q8IUC6 712 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 CCNYQ8ND76 341 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 LRRN4Q8WUT4 740 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 TOP1MTQ969P6 601 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 HIC2Q96JB3 615 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 TNIP3Q96KP6 325 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 EPAS1Q99814 870 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 MCMBPQ9BTE3 642 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 PRDM12Q9H4Q4 367 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 MRM3Q9HC36 420 aaKnown RBP13.52□□□□□ -0.24
UBE3B-209ENST00000539584 SLC17A6Q9P2U8 582 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 EPS15L1Q9UBC2 864 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 TLK1Q9UKI8 766 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 WDR90Q96KV7 1748 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 KAT6AQ92794 2004 aa13.52□□□□□ -0.24
UBE3B-209ENST00000539584 FAM163BP0C2L3 166 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 ME2P23368 584 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 GRIA2P42262 883 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 ATXN1P54253 815 aaKnown RBP13.52□□□□□ -0.25
UBE3B-209ENST00000539584 DPYSQ14117 519 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 UGP2Q16851 508 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 ZNF423Q2M1K9 1284 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 B3GNT6Q6ZMB0 384 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 CMC1Q7Z7K0 106 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 C7orf31Q8N865 590 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 NLRP7Q8WX94 980 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 LZICQ8WZA0 190 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 IRGQQ8WZA9 623 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 NTAN1Q96AB6 310 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 ZNF669Q96BR6 464 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-209ENST00000539584 SNX27Q96L92 541 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 FCRL3Q96P31 734 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-209ENST00000539584 CAMKK2Q96RR4 588 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 GATA5Q9BWX5 397 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-209ENST00000539584 ZNF385DQ9H6B1 395 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 GDAP2Q9NXN4 497 aa13.52□□□□□ -0.25
UBE3B-209ENST00000539584 UTP6Q9NYH9 597 aaKnown RBP13.52□□□□□ -0.25
UBE3B-209ENST00000539584 KLHL8Q9P2G9 620 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-209ENST00000539584 CAPN8A6NHC0 703 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 NFKBIEO00221 500 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 DCLK1O15075 740 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 XPOTO43592 962 aaKnown RBP13.51□□□□□ -0.25
UBE3B-209ENST00000539584 BCAS2O75934 225 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-209ENST00000539584 DDHD2O94830 711 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 LCP1P13796 627 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 PSMD8P48556 350 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 TLR1Q15399 786 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 BSPRYQ5W0U4 402 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 KCTD11Q693B1 232 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 FBXL19Q6PCT2 694 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 NAPRTQ6XQN6 538 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 FAM131BQ86XD5 332 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 TNS4Q8IZW8 715 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 DEFB106AQ8N104 65 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 PLD6Q8N2A8 252 aaKnown RBP13.51□□□□□ -0.25
UBE3B-209ENST00000539584 EZH1Q92800 747 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-209ENST00000539584 MAML3Q96JK9 1138 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 ZNF560Q96MR9 790 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 GCNAQ96QF7 691 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 NPY6RQ99463 290 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 GPR22Q99680 433 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 ACE2Q9BYF1 805 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-209ENST00000539584 SETD4Q9NVD3 440 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 RIMS3Q9UJD0 308 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 UBQLN1Q9UMX0 589 aaKnown RBP13.51□□□□□ -0.25
UBE3B-209ENST00000539584 DMTF1Q9Y222 760 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 CDYLQ9Y232 598 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 GJA3Q9Y6H8 435 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 PLXNA1Q9UIW2 1896 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 EEF2KO00418 725 aaKnown RBP13.51□□□□□ -0.25
UBE3B-209ENST00000539584 AIM2O14862 343 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 ADCY6O43306 1168 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 USP2O75604 605 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-209ENST00000539584 SORBS2O94875 1100 aaKnown RBP13.51□□□□□ -0.25
UBE3B-209ENST00000539584 LGALS2P05162 132 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 SMIM18P0DKX4 95 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 HSPA1AP0DMV8 641 aaKnown RBP13.51□□□□□ -0.25
UBE3B-209ENST00000539584 HSPA1BP0DMV9 641 aaKnown RBP13.51□□□□□ -0.25
UBE3B-209ENST00000539584 TFEBP19484 476 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 PMLP29590 882 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 GNL1P36915 607 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-209ENST00000539584 IGBP1P78318 339 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 ZNF33AQ06730 810 aa13.51□□□□□ -0.25
UBE3B-209ENST00000539584 PPIDQ08752 370 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms