RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 TPI1P60174 286 aa13.33□□□□□ -0.28
CCDC42-202ENST00000539522 ARF5P84085 180 aa13.33□□□□□ -0.28
CCDC42-202ENST00000539522 SLC10A2Q12908 348 aaPredicted RBP13.33□□□□□ -0.28
CCDC42-202ENST00000539522 CDH18Q13634 790 aa13.33□□□□□ -0.28
CCDC42-202ENST00000539522 ENPP2Q13822 863 aa13.33□□□□□ -0.28
CCDC42-202ENST00000539522 HADHQ16836 314 aaKnown RBP13.33□□□□□ -0.28
CCDC42-202ENST00000539522 ANKRD20A8PQ5CZ79 823 aa13.33□□□□□ -0.28
CCDC42-202ENST00000539522 RNF219Q5W0B1 726 aaPredicted RBP13.33□□□□□ -0.28
CCDC42-202ENST00000539522 MBLAC2Q68D91 279 aa13.33□□□□□ -0.28
CCDC42-202ENST00000539522 NCBP2-AS2Q69YL0 99 aa13.33□□□□□ -0.28
CCDC42-202ENST00000539522 ARHGAP36Q6ZRI8 547 aa13.33□□□□□ -0.28
CCDC42-202ENST00000539522 SETD3Q86TU7 594 aaPredicted RBP13.33□□□□□ -0.28
CCDC42-202ENST00000539522 KATNAL2Q8IYT4 538 aa13.33□□□□□ -0.28
CCDC42-202ENST00000539522 UMODL1-AS1Q8N2C9 162 aa13.33□□□□□ -0.28
CCDC42-202ENST00000539522 IL17RCQ8NAC3 791 aa13.33□□□□□ -0.28
CCDC42-202ENST00000539522 CYB5D2Q8WUJ1 264 aa13.33□□□□□ -0.28
CCDC42-202ENST00000539522 ARHGEF2Q92974 986 aaKnown RBP13.33□□□□□ -0.28
CCDC42-202ENST00000539522 RNF25Q96BH1 459 aaPredicted RBP13.33□□□□□ -0.28
CCDC42-202ENST00000539522 SHDQ96IW2 340 aa13.33□□□□□ -0.28
CCDC42-202ENST00000539522 EPAS1Q99814 870 aa13.33□□□□□ -0.28
CCDC42-202ENST00000539522 ACE2Q9BYF1 805 aaPredicted RBP13.33□□□□□ -0.28
CCDC42-202ENST00000539522 KIAA1522Q9P206 1035 aaPredicted RBP13.33□□□□□ -0.28
CCDC42-202ENST00000539522 ZNF318Q5VUA4 2279 aa13.33□□□□□ -0.28
CCDC42-202ENST00000539522 EML5Q05BV3 1969 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.32□□□□□ -0.28
CCDC42-202ENST00000539522 ILVBLA1L0T0 632 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 TBC1D3BA6NDS4 549 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 GPR37L1O60883 481 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 MT-CO1P00395 513 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 APODP05090 189 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 PYGMP11217 842 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 COL9A1P20849 921 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 OR1E1P30953 314 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 HTR7P34969 479 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 MAPKAPK2P49137 400 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 STK19P49842 368 aaPredicted RBP13.32□□□□□ -0.28
CCDC42-202ENST00000539522 GNA12Q03113 381 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 GRSF1Q12849 480 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC42-202ENST00000539522 ZNF177Q13360 481 aaPredicted RBP13.32□□□□□ -0.28
CCDC42-202ENST00000539522 LLGL1Q15334 1064 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 DGKKQ5KSL6 1271 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 FAM182AQ5T1J6 154 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 MEI1Q5TIA1 1274 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 C1orf228Q6PIY5 440 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 PEX26Q7Z412 305 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 SUGP1Q8IWZ8 645 aaKnown RBP13.32□□□□□ -0.28
CCDC42-202ENST00000539522 MAML2Q8IZL2 1156 aaPredicted RBP13.32□□□□□ -0.28
CCDC42-202ENST00000539522 AHI1Q8N157 1196 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 CCDC33Q8N5R6 958 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 PLD5Q8N7P1 536 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 PBXIP1Q96AQ6 731 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 HMCESQ96FZ2 354 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 ZNF419Q96HQ0 510 aaPredicted RBP13.32□□□□□ -0.28
CCDC42-202ENST00000539522 CELF6Q96J87 481 aaKnown RBP13.32□□□□□ -0.28
CCDC42-202ENST00000539522 RNF157Q96PX1 679 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 ZNF670Q9BS34 389 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 TLR10Q9BXR5 811 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 SLC39A8Q9C0K1 460 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 CHRDQ9H2X0 955 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 TMEM245Q9H330 911 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 MTG2Q9H4K7 406 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 ELOVL2Q9NXB9 296 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 RCOR3Q9P2K3 495 aaPredicted RBP13.32□□□□□ -0.28
CCDC42-202ENST00000539522 AMFRQ9UKV5 643 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 SIT1Q9Y3P8 196 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 SAR1BQ9Y6B6 198 aa13.32□□□□□ -0.28
CCDC42-202ENST00000539522 LRRD1A4D1F6 860 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 K7ERQ8 282 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 SGK1O00141 431 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 DLL1O00548 723 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 FGF10O15520 208 aaPredicted RBP13.31□□□□□ -0.28
CCDC42-202ENST00000539522 MFSD11O43934 449 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 ZNF821O75541 412 aaPredicted RBP13.31□□□□□ -0.28
CCDC42-202ENST00000539522 PEX11BO96011 259 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 KRT1P04264 644 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 RHOCP08134 193 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 KRT10P13645 584 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 PRKCHP24723 683 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 TIE1P35590 1138 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 IL12RB1P42701 662 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 RPS9P46781 194 aaKnown RBP13.31□□□□□ -0.28
CCDC42-202ENST00000539522 CLCN5P51795 746 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 AMPD2Q01433 879 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 MTAPQ13126 283 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 ZNF234Q14588 700 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 PAFAH1B3Q15102 231 aaKnown RBP13.31□□□□□ -0.28
CCDC42-202ENST00000539522 PDK2Q15119 407 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 RPS6KA1Q15418 735 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 C2orf27AQ580R0 203 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 SLC9A4Q6AI14 798 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 TMEM92Q6UXU6 159 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 SPOCD1Q6ZMY3 1216 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 FBXL6Q8N531 539 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 ALLCQ8N6M5 410 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 KCTD6Q8NC69 237 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 RPLP0P6Q8NHW5 317 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 LRRN4Q8WUT4 740 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 NELL2Q99435 816 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 CALN1Q9BXU9 219 aa13.31□□□□□ -0.28
CCDC42-202ENST00000539522 RETREG1Q9H6L5 497 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms