RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 KLF16Q9BXK1 252 aaPredicted RBP11.37□□□□□ -0.59
CTCFL-212ENST00000539382 VPS37BQ9H9H4 285 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 TMEM248Q9NWD8 314 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 IGSF9Q9P2J2 1179 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 PPARGC1AQ9UBK2 798 aaKnown RBP11.37□□□□□ -0.59
CTCFL-212ENST00000539382 RSPH14Q9UHP6 348 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 SLC12A6Q9UHW9 1150 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.37□□□□□ -0.59
CTCFL-212ENST00000539382 HMGB1P1B2RPK0 211 aaPredicted RBP11.37□□□□□ -0.59
CTCFL-212ENST00000539382 SMAPO00193 183 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 NDC80O14777 642 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 GRM6O15303 877 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 EIF3HO15372 352 aaKnown RBP eCLIP11.37□□□□□ -0.59
CTCFL-212ENST00000539382 USP12O75317 370 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 PEX11BO96011 259 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 C8AP07357 584 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 ABHD2P08910 425 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 IRF1P10914 325 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 GJA1P17302 382 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 TPSB2P20231 275 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 TACR2P21452 398 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 HPDP32754 393 aaPredicted RBP11.37□□□□□ -0.59
CTCFL-212ENST00000539382 CRADDP78560 199 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 TPSAB1Q15661 275 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 STXBP5Q5T5C0 1151 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 NUGGCQ68CJ6 796 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 OTOP3Q7RTS5 596 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 CHSY1Q86X52 802 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 TMC8Q8IU68 726 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 UMODL1-AS1Q8N2C9 162 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 LZTR1Q8N653 840 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 ARL14EPQ8N8R7 260 aaPredicted RBP11.37□□□□□ -0.59
CTCFL-212ENST00000539382 MCUQ8NE86 351 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 PGM2Q96G03 612 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 SIGLEC10Q96LC7 697 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 TEKT5Q96M29 485 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 PHACTR1Q9C0D0 580 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 BRD8Q9H0E9 1235 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 ENTPD7Q9NQZ7 604 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 EURLQ9NYK6 297 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 RABGEF1Q9UJ41 708 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 IRAK3Q9Y616 596 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 XIRP2A4UGR9 3374 aa11.37□□□□□ -0.59
CTCFL-212ENST00000539382 E7EVH7 732 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 J3KR12 359 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 ACSL4O60488 711 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 STK10O94804 968 aaKnown RBP11.36□□□□□ -0.59
CTCFL-212ENST00000539382 C1QAP02745 245 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 CCNB1P14635 433 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 CREB1P16220 341 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 NFKB1P19838 968 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 CCNCP24863 283 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 CORO1AP31146 461 aaKnown RBP11.36□□□□□ -0.59
CTCFL-212ENST00000539382 FDFT1P37268 417 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 RPS24P62847 133 aaKnown RBP11.36□□□□□ -0.59
CTCFL-212ENST00000539382 CYP4F8P98187 520 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 CBLBQ13191 982 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 CCDC38Q502W7 563 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 AGBL2Q5U5Z8 902 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 KDM7AQ6ZMT4 941 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 SRLQ86TD4 932 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 LGI2Q8N0V4 545 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 ATPAF2Q8N5M1 289 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 KREMEN2Q8NCW0 462 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 PRICKLE1Q96MT3 831 aaPredicted RBP11.36□□□□□ -0.59
CTCFL-212ENST00000539382 CDK5RAP1Q96SZ6 601 aaKnown RBP11.36□□□□□ -0.59
CTCFL-212ENST00000539382 MLPHQ9BV36 600 aaPredicted RBP11.36□□□□□ -0.59
CTCFL-212ENST00000539382 RABEP2Q9H5N1 569 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 TRPC7Q9HCX4 862 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 HCFC1R1Q9NWW0 138 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 UBP1Q9NZI7 540 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 TBK1Q9UHD2 729 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 RRP15Q9Y3B9 282 aaKnown RBP11.36□□□□□ -0.59
CTCFL-212ENST00000539382 CEP290O15078 2479 aa11.36□□□□□ -0.59
CTCFL-212ENST00000539382 TRANK1O15050 2925 aa11.35□□□□□ -0.59
CTCFL-212ENST00000539382 A0A087WUV0 522 aaPredicted RBP11.35□□□□□ -0.59
CTCFL-212ENST00000539382 GREM1O60565 184 aa11.35□□□□□ -0.59
CTCFL-212ENST00000539382 RFPL2O75678 378 aa11.35□□□□□ -0.59
CTCFL-212ENST00000539382 TCEA3O75764 348 aa11.35□□□□□ -0.59
CTCFL-212ENST00000539382 ADH1AP07327 375 aa11.35□□□□□ -0.59
CTCFL-212ENST00000539382 NR1D1P20393 614 aa11.35□□□□□ -0.59
CTCFL-212ENST00000539382 GABRR2P28476 465 aa11.35□□□□□ -0.59
CTCFL-212ENST00000539382 HARS2P49590 506 aaKnown RBP11.35□□□□□ -0.59
CTCFL-212ENST00000539382 KPNA1P52294 538 aaPredicted RBP11.35□□□□□ -0.59
CTCFL-212ENST00000539382 COG7P83436 770 aa11.35□□□□□ -0.59
CTCFL-212ENST00000539382 C6orf118Q5T5N4 469 aa11.35□□□□□ -0.59
CTCFL-212ENST00000539382 KCTD11Q693B1 232 aa11.35□□□□□ -0.59
CTCFL-212ENST00000539382 CEP128Q6ZU80 1094 aa11.35□□□□□ -0.59
CTCFL-212ENST00000539382 PRPF39Q86UA1 669 aaKnown RBP11.35□□□□□ -0.59
CTCFL-212ENST00000539382 SPATA22Q8NHS9 363 aa11.35□□□□□ -0.59
CTCFL-212ENST00000539382 MRRFQ96E11 262 aaKnown RBP11.35□□□□□ -0.59
CTCFL-212ENST00000539382 OXNAD1Q96HP4 312 aaPredicted RBP11.35□□□□□ -0.59
CTCFL-212ENST00000539382 TTC25Q96NG3 672 aa11.35□□□□□ -0.59
CTCFL-212ENST00000539382 ROPN1BQ9BZX4 212 aaPredicted RBP11.35□□□□□ -0.59
CTCFL-212ENST00000539382 GBA3Q9H227 469 aa11.35□□□□□ -0.59
CTCFL-212ENST00000539382 ROPN1Q9HAT0 212 aaPredicted RBP11.35□□□□□ -0.59
CTCFL-212ENST00000539382 IPO11Q9UI26 975 aaKnown RBP11.35□□□□□ -0.59
CTCFL-212ENST00000539382 AGO1Q9UL18 857 aaKnown RBP11.35□□□□□ -0.59
CTCFL-212ENST00000539382 OBSL1O75147 1896 aa11.35□□□□□ -0.59
CTCFL-212ENST00000539382 BPTFQ12830 3046 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms