RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 FBXL22Q6P050 247 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 LAYNQ6UX15 382 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 SLCO6A1Q86UG4 719 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 IQCHQ86VS3 1027 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 CIR1Q86X95 450 aaPredicted RBP8.9□□□□□ -0.98
DDB1-212ENST00000538470 IRF2BP1Q8IU81 584 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 PASD1Q8IV76 773 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 STK40Q8N2I9 435 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 PNPLA1Q8N8W4 532 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 FRS2Q8WU20 508 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 PGAP3Q96FM1 320 aaPredicted RBP8.9□□□□□ -0.98
DDB1-212ENST00000538470 RPL10LQ96L21 214 aaKnown RBP8.9□□□□□ -0.98
DDB1-212ENST00000538470 CCDC114Q96M63 670 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 CCDC86Q9H6F5 360 aaKnown RBP8.9□□□□□ -0.98
DDB1-212ENST00000538470 GDF3Q9NR23 364 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 AASDHPPTQ9NRN7 309 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 DKK4Q9UBT3 224 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 FTSJ1Q9UET6 329 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 SLCO3A1Q9UIG8 710 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 DMTF1Q9Y222 760 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 BTBD3Q9Y2F9 522 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 HS3ST4Q9Y661 456 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 KNTC1P50748 2209 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 ARID1BQ8NFD5 2236 aaPredicted RBP8.9□□□□□ -0.98
DDB1-212ENST00000538470 FREM2Q5SZK8 3169 aa8.9□□□□□ -0.98
DDB1-212ENST00000538470 DOCK9Q9BZ29 2069 aa8.9□□□□□ -0.99
DDB1-212ENST00000538470 SYNJ2BP-COX16A0A087WUM0 186 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.89□□□□□ -0.99
DDB1-212ENST00000538470 A0A1W2PR77 199 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 FAM47DPA6NHR8 397 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 E9PAM4 449 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 PLRG1O43660 514 aaKnown RBP8.89□□□□□ -0.99
DDB1-212ENST00000538470 MAGEC1O60732 1142 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 LSM8O95777 96 aaKnown RBP8.89□□□□□ -0.99
DDB1-212ENST00000538470 F9P00740 461 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 IL1BP01584 269 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 ATXN1LP0C7T5 689 aaKnown RBP8.89□□□□□ -0.99
DDB1-212ENST00000538470 CDK4P11802 303 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 ERCC5P28715 1186 aaPredicted RBP8.89□□□□□ -0.99
DDB1-212ENST00000538470 CD38P28907 300 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 EPHA8P29322 1005 aaPredicted RBP8.89□□□□□ -0.99
DDB1-212ENST00000538470 DRD3P35462 400 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 ARRB1P49407 418 aaPredicted RBP8.89□□□□□ -0.99
DDB1-212ENST00000538470 CLCN6P51797 869 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 CDH4P55283 916 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 SLC6A3Q01959 620 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 CENPCQ03188 943 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 SCAPQ12770 1279 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 OVGP1Q12889 678 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 NME3Q13232 169 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 ZNF177Q13360 481 aaPredicted RBP8.89□□□□□ -0.99
DDB1-212ENST00000538470 CAMK4Q16566 473 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 OTUD1Q5VV17 481 aaPredicted RBP8.89□□□□□ -0.99
DDB1-212ENST00000538470 SLC47A2Q86VL8 602 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 TRIM69Q86WT6 500 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 CREBRFQ8IUR6 639 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 FAM71AQ8IYT1 594 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 WDTC1Q8N5D0 677 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 SH2D3CQ8N5H7 860 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 DCAF4L2Q8NA75 395 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 TMEM35BQ8NCS4 154 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 MSANTD4Q8NCY6 345 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 OR14C36Q8NHC7 312 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 NPY6RQ99463 290 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 C2orf49Q9BVC5 232 aaPredicted RBP8.89□□□□□ -0.99
DDB1-212ENST00000538470 NDST4Q9H3R1 872 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 CLSTN2Q9H4D0 955 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 ERVMER34-1Q9H9K5 563 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 ARHGEF38Q9NXL2 777 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 COX16Q9P0S2 106 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 VPS28Q9UK41 221 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 DNAJC12Q9UKB3 198 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 VANGL2Q9ULK5 521 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 HS3ST2Q9Y278 367 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 TBC1D30Q9Y2I9 924 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 PCDHGA1Q9Y5H4 931 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 ITPR1Q14643 2758 aa8.89□□□□□ -0.99
DDB1-212ENST00000538470 TRPM6Q9BX84 2022 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 M0QYT0 321 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 PAGE1O75459 146 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 GRAP2O75791 330 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 WNT1P04628 370 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 CLCN1P35523 988 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 GABRB2P47870 512 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 CXCR3P49682 368 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 SULT1E1P49888 294 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 NXPH1P58417 271 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 PPP2CBP62714 309 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 PPP2CAP67775 309 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 KRT83P78385 493 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 IL9RQ01113 521 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 APBA1Q02410 837 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 CCDC15Q0P6D6 951 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 KCNJ12Q14500 433 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 SMAD1Q15797 465 aaKnown RBP8.88□□□□□ -0.99
DDB1-212ENST00000538470 VWA3BQ502W6 1294 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 SETMARQ53H47 684 aaPredicted RBP8.88□□□□□ -0.99
DDB1-212ENST00000538470 CT47A1Q5JQC4 288 aaPredicted RBP8.88□□□□□ -0.99
DDB1-212ENST00000538470 KCNT1Q5JUK3 1230 aa8.88□□□□□ -0.99
DDB1-212ENST00000538470 FAM102AQ5T9C2 384 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms