RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SMIM10L2BP0DMW5 78 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 UMPSP11172 480 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 NTSP30990 170 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 CCR4P51679 360 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 NOMO2Q5JPE7 1267 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 CES3Q6UWW8 571 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 VSIG10LQ86VR7 867 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 EID3Q8N140 333 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 CORO1BQ9BR76 489 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 HGH1Q9BTY7 390 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 BDH2Q9BUT1 245 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 C10orf88Q9H8K7 445 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 PTPRHQ9HD43 1115 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 NDUFA13Q9P0J0 144 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 PSME2Q9UL46 239 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 RAB23Q9ULC3 237 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 LRRC14BA6NHZ5 514 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 PDE2AO00408 941 aaPredicted RBP17.09■□□□□ 0.33
SCARB1-205ENST00000538291 RIPK2O43353 540 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 TLX1P31314 330 aaPredicted RBP17.09■□□□□ 0.33
SCARB1-205ENST00000538291 S100A3P33764 101 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 ZCWPW2Q504Y3 356 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 ARMCX4Q5H9R4 360 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 NOL9Q5SY16 702 aaKnown RBP17.09■□□□□ 0.33
SCARB1-205ENST00000538291 TERB1Q8NA31 727 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 C19orf60Q96EN9 201 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 SOHLH2Q9NX45 425 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 TRUB2O95900 331 aaKnown RBP17.09■□□□□ 0.33
SCARB1-205ENST00000538291 NPR3P17342 541 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 IRX1P78414 480 aaPredicted RBP17.09■□□□□ 0.33
SCARB1-205ENST00000538291 MSLNQ13421 630 aaPredicted RBP17.09■□□□□ 0.33
SCARB1-205ENST00000538291 DDR2Q16832 855 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 TRIM16LQ309B1 348 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 DNAAF5Q86Y56 855 aa17.09■□□□□ 0.33
SCARB1-205ENST00000538291 VAV1P15498 845 aa17.08■□□□□ 0.33
SCARB1-205ENST00000538291 CXCR2P25025 360 aa17.08■□□□□ 0.33
SCARB1-205ENST00000538291 FGD3Q5JSP0 725 aa17.08■□□□□ 0.33
SCARB1-205ENST00000538291 SERPINA13PQ6UXR4 307 aa17.08■□□□□ 0.33
SCARB1-205ENST00000538291 NKX2-3Q8TAU0 364 aa17.08■□□□□ 0.33
SCARB1-205ENST00000538291 PROX1Q92786 737 aa17.08■□□□□ 0.33
SCARB1-205ENST00000538291 TPD52L3Q96J77 140 aa17.08■□□□□ 0.33
SCARB1-205ENST00000538291 SH3GL3Q99963 347 aa17.08■□□□□ 0.33
SCARB1-205ENST00000538291 KLHL4Q9C0H6 718 aa17.08■□□□□ 0.33
SCARB1-205ENST00000538291 PGK1P00558 417 aa17.08■□□□□ 0.33
SCARB1-205ENST00000538291 PTPN4P29074 926 aa17.08■□□□□ 0.33
SCARB1-205ENST00000538291 GATAD2AQ86YP4 633 aa17.08■□□□□ 0.33
SCARB1-205ENST00000538291 PIK3R5Q8WYR1 880 aa17.08■□□□□ 0.33
SCARB1-205ENST00000538291 MLPHQ9BV36 600 aaPredicted RBP17.08■□□□□ 0.33
SCARB1-205ENST00000538291 L2HGDHQ9H9P8 463 aa17.08■□□□□ 0.33
SCARB1-205ENST00000538291 FZD1Q9UP38 647 aa17.08■□□□□ 0.33
SCARB1-205ENST00000538291 USP32Q8NFA0 1604 aa17.08■□□□□ 0.32
SCARB1-205ENST00000538291 DCCP43146 1447 aa17.08■□□□□ 0.32
SCARB1-205ENST00000538291 HOXA10P31260 410 aaPredicted RBP17.08■□□□□ 0.32
SCARB1-205ENST00000538291 MARSP56192 900 aaKnown RBP17.08■□□□□ 0.32
SCARB1-205ENST00000538291 MAP2K5Q13163 448 aa17.08■□□□□ 0.32
SCARB1-205ENST00000538291 RAP1GAP2Q684P5 730 aa17.08■□□□□ 0.32
SCARB1-205ENST00000538291 ERLEC1Q96DZ1 483 aa17.08■□□□□ 0.32
SCARB1-205ENST00000538291 DCLRE1BQ9H816 532 aa17.08■□□□□ 0.32
SCARB1-205ENST00000538291 MRPL42Q9Y6G3 142 aaKnown RBP17.08■□□□□ 0.32
SCARB1-205ENST00000538291 MOXD2PA6NHM9 499 aa17.08■□□□□ 0.32
SCARB1-205ENST00000538291 FKTNO75072 461 aa17.08■□□□□ 0.32
SCARB1-205ENST00000538291 NEPROQ6NW34 567 aa17.08■□□□□ 0.32
SCARB1-205ENST00000538291 ACTRT2Q8TDY3 377 aa17.08■□□□□ 0.32
SCARB1-205ENST00000538291 HSFY1Q96LI6 401 aa17.08■□□□□ 0.32
SCARB1-205ENST00000538291 SIKE1Q9BRV8 207 aa17.08■□□□□ 0.32
SCARB1-205ENST00000538291 KLHL3Q9UH77 587 aa17.08■□□□□ 0.32
SCARB1-205ENST00000538291 ANXA5P08758 320 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 RBL1P28749 1068 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 SLC12A3P55017 1021 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 USP41Q3LFD5 358 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 ZC3H12AQ5D1E8 599 aaKnown RBP17.07■□□□□ 0.32
SCARB1-205ENST00000538291 KRT77Q7Z794 578 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 DHFR2Q86XF0 187 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 ATL1Q8WXF7 558 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 RHBGQ9H310 441 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 KIAA1210Q9ULL0 1709 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 PIK3C2BO00750 1634 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 C15orf38-AP3S2A0A0A6YYH1 394 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 FAM25AB3EWG3 89 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 FAM25CB3EWG5 89 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 FAM25GB3EWG6 89 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 H3BN98 237 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 TRDMT1O14717 391 aaKnown RBP17.07■□□□□ 0.32
SCARB1-205ENST00000538291 MRASO14807 208 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 SSTR1P30872 391 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 MAGEA10P43363 369 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-205ENST00000538291 CCL23P55773 120 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 RAB14P61106 215 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 IRF8Q02556 426 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 TOMM20Q15388 145 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 CNGA2Q16280 664 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 MARK2Q7KZI7 788 aaKnown RBP17.07■□□□□ 0.32
SCARB1-205ENST00000538291 ARPINQ7Z6K5 226 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 KIAA0319LQ8IZA0 1049 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 DDHD1Q8NEL9 900 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 TCP10LQ8TDR4 215 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 ELMO1Q92556 727 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 LRRC39Q96DD0 335 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 CXorf40BQ96DE9 158 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 MTMR8Q96EF0 704 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms