RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 PBXIP1Q96AQ6 731 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ISG20Q96AZ6 181 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TBC1D20Q96BZ9 403 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ASIC4Q96FT7 647 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PBKQ96KB5 322 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 MYADMQ96S97 322 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 NUP85Q9BW27 656 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 SLC46A2Q9BY10 475 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 FRMD8Q9BZ67 464 aaPredicted RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 CDH19Q9H159 772 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 SCUBE2Q9NQ36 999 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 MCM8Q9UJA3 840 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ANAPC7Q9UJX3 599 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 SIT1Q9Y3P8 196 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 SCN5AQ14524 2016 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 FAM25EA8MYX2 175 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 HHLA1C9JL84 531 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 CLDN5O00501 218 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PJA2O43164 708 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PAPSS1O43252 624 aaPredicted RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 LRP3O75074 770 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ATP2C2O75185 946 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 NDUFA10O95299 355 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PABPC1P11940 636 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 GNSP15586 552 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 FECHP22830 423 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 NTSR1P30989 418 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ADRA1BP35368 520 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 RPL26P61254 145 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 CYP4F8P98187 520 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 CCDC14Q49A88 953 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 MS4A13Q5J8X5 152 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF776Q68DI1 518 aaPredicted RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PMF1Q6P1K2 205 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 NEK5Q6P3R8 708 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF449Q6P9G9 518 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TMCO3Q6UWJ1 677 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 MON1BQ7L1V2 547 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PEX26Q7Z412 305 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 IRF2BP2Q7Z5L9 587 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 SLC47A2Q86VL8 602 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 MIB1Q86YT6 1006 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 KCTD6Q8NC69 237 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 BBOF1Q8ND07 529 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 CEP76Q8TAP6 659 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 DDX1Q92499 740 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 CHAMP1Q96JM3 812 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 B3GALT6Q96L58 329 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TUBGCP5Q96RT8 1024 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TTYH3Q9C0H2 523 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ABCG4Q9H172 646 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 CHRDQ9H2X0 955 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 SP110Q9HB58 689 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 LTB4R2Q9NPC1 389 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 METTL5Q9NRN9 209 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TMLHEQ9NVH6 421 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 DNAJC17Q9NVM6 304 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 DNAAF2Q9NVR5 837 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ARHGEF38Q9NXL2 777 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 QPCTLQ9NXS2 382 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 SEPT3Q9UH03 358 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ADAMTS1Q9UHI8 967 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 RPL26L1Q9UNX3 145 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PRELID1Q9Y255 219 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 C2CD4BA6NLJ0 364 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ENO4A6NNW6 628 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 LINC01565O15544 149 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 RNGTTO60942 597 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ERLIN1O75477 346 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 STC2O76061 302 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 LCA5LO95447 670 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 GSRP00390 522 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PENKP01210 267 aaPredicted RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 CYP2A6P11509 494 aaPredicted RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 HNRNPLP14866 589 aaKnown RBP eCLIP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TCP1P17987 556 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 AOC1P19801 751 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 CSNK1DP48730 415 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 CDH6P55285 790 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 AP1S1P61966 158 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 CTAG1AP78358 180 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PDE1BQ01064 536 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ELP6Q0PNE2 266 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TBX2Q13207 712 aaPredicted RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 UBXN2BQ14CS0 331 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 RPS6KA1Q15418 735 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PTPN20Q4JDL3 420 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 INO80DQ53TQ3 878 aaPredicted RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 HSP90AA4PQ58FG1 418 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TXNDC8Q6A555 127 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PPP1R21Q6ZMI0 780 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PAQR9Q6ZVX9 377 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 GAREM2Q75VX8 874 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 DCP2Q8IU60 420 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 LGI2Q8N0V4 545 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 C12orf29Q8N999 325 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 EXD1Q8NHP7 514 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 FAM172AQ8WUF8 416 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ANKRD49Q8WVL7 239 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms