RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 IFI35P80217 286 aaPredicted RBP12.64□□□□□ -0.39
DDB1-209ENST00000537877 WASHC5Q12768 1159 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 ZNF177Q13360 481 aaPredicted RBP12.64□□□□□ -0.39
DDB1-209ENST00000537877 GRIN2CQ14957 1233 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 COL19A1Q14993 1142 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 MORF4L2Q15014 288 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 POLD3Q15054 466 aaPredicted RBP12.64□□□□□ -0.39
DDB1-209ENST00000537877 ANKRD20A2Q5SQ80 823 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 ANKRD20A1Q5TYW2 823 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 ANKRD20A3Q5VUR7 823 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 RNF43Q68DV7 783 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 CES5AQ6NT32 575 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 ARHGEF18Q6ZSZ5 1173 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 GET4Q7L5D6 327 aaPredicted RBP12.64□□□□□ -0.39
DDB1-209ENST00000537877 PRUNE1Q86TP1 453 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 HOOK3Q86VS8 718 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 GSPT2Q8IYD1 628 aaKnown RBP12.64□□□□□ -0.39
DDB1-209ENST00000537877 FBXO25Q8TCJ0 367 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 CAVIN3Q969G5 261 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 TMA16Q96EY4 203 aaKnown RBP12.64□□□□□ -0.39
DDB1-209ENST00000537877 HMCESQ96FZ2 354 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 RIPOR3Q96MK2 946 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 ZSWIM3Q96MP5 696 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 FOXP3Q9BZS1 431 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 TSPYL1Q9H0U9 437 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 OBP2AQ9NY56 170 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 CLEC1BQ9P126 229 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 IPO11Q9UI26 975 aaKnown RBP12.64□□□□□ -0.39
DDB1-209ENST00000537877 ANAPC5Q9UJX4 755 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 TRHDEQ9UKU6 1024 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 TPX2Q9ULW0 747 aaKnown RBP12.64□□□□□ -0.39
DDB1-209ENST00000537877 TBC1D30Q9Y2I9 924 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 DENND4AQ7Z401 1863 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 TRANK1O15050 2925 aa12.64□□□□□ -0.39
DDB1-209ENST00000537877 TNRC18O15417 2968 aaPredicted RBP12.63□□□□□ -0.39
DDB1-209ENST00000537877 SCAMP3O14828 347 aaKnown RBP12.63□□□□□ -0.39
DDB1-209ENST00000537877 MATN3O15232 486 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 TBX10O75333 385 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 LUC7L3O95232 432 aaKnown RBP12.63□□□□□ -0.39
DDB1-209ENST00000537877 RHOCP08134 193 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 PTPN3P26045 913 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 FDFT1P37268 417 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 MTHFRP42898 656 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 ITGA8P53708 1063 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 GNA12Q03113 381 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 SERINC3Q13530 473 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 CBX2Q14781 532 aaPredicted RBP12.63□□□□□ -0.39
DDB1-209ENST00000537877 KCTD19Q17RG1 926 aaPredicted RBP12.63□□□□□ -0.39
DDB1-209ENST00000537877 ATAT1Q5SQI0 421 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 RNASEH2BQ5TBB1 312 aaKnown RBP12.63□□□□□ -0.39
DDB1-209ENST00000537877 ITPRIPL1Q6GPH6 555 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 HIBCHQ6NVY1 386 aaPredicted RBP12.63□□□□□ -0.39
DDB1-209ENST00000537877 RHBDF2Q6PJF5 856 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 CEP128Q6ZU80 1094 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 CCDC117Q8IWD4 279 aaPredicted RBP12.63□□□□□ -0.39
DDB1-209ENST00000537877 PPIL6Q8IXY8 311 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 ZNF557Q8N988 423 aaPredicted RBP12.63□□□□□ -0.39
DDB1-209ENST00000537877 TTC16Q8NEE8 873 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 RIN3Q8TB24 985 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 CCDC110Q8TBZ0 833 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 LRRN4Q8WUT4 740 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 DEPDC1BQ8WUY9 529 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 MAML1Q92585 1016 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 FGF13Q92913 245 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 SMARCD2Q92925 531 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 ARHGEF2Q92974 986 aaKnown RBP12.63□□□□□ -0.39
DDB1-209ENST00000537877 ASB16Q96NS5 453 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 APOL5Q9BWW9 433 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 S1PR5Q9H228 398 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 NEUROG2Q9H2A3 272 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 SP110Q9HB58 689 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 TRPV4Q9HBA0 871 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 SEPT10Q9P0V9 454 aa12.63□□□□□ -0.39
DDB1-209ENST00000537877 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
DDB1-209ENST00000537877 KIF26AQ9ULI4 1882 aaPredicted RBP12.62□□□□□ -0.39
DDB1-209ENST00000537877 H0Y626 953 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 KCNK1O00180 336 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 CHADO15335 359 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 TP73O15350 636 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 HOXD9P28356 352 aaPredicted RBP12.62□□□□□ -0.39
DDB1-209ENST00000537877 MAGEA6P43360 314 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 NRLP54845 237 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 OXCT1P55809 520 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 BASP1P80723 227 aaKnown RBP12.62□□□□□ -0.39
DDB1-209ENST00000537877 IL10RBQ08334 325 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 CDH18Q13634 790 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 ADGRE1Q14246 886 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 TEX44Q53QW1 395 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 BEND6Q5SZJ8 279 aaPredicted RBP12.62□□□□□ -0.39
DDB1-209ENST00000537877 CXorf57Q6NSI4 855 aaKnown RBP12.62□□□□□ -0.39
DDB1-209ENST00000537877 POTEHQ6S545 545 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 ARHGAP36Q6ZRI8 547 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 ZNF567Q8N184 647 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 DDI1Q8WTU0 396 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 NSMCE1Q8WV22 266 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 CPT1BQ92523 772 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 EXOC4Q96A65 974 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 E2F7Q96AV8 911 aa12.62□□□□□ -0.39
DDB1-209ENST00000537877 PABPC5Q96DU9 382 aaKnown RBP12.62□□□□□ -0.39
DDB1-209ENST00000537877 ZNF599Q96NL3 588 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms