RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 RABGGTAQ92696 567 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 STAMQ92783 540 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 DNAJC19Q96DA6 116 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 VMP1Q96GC9 406 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TMEM41AQ96HV5 264 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CPB2Q96IY4 423 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 LOXL4Q96JB6 756 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 HIST1H2AHQ96KK5 128 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RPL10LQ96L21 214 aaKnown RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 NLRP4Q96MN2 994 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 WDR92Q96MX6 357 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZMAT2Q96NC0 199 aaKnown RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RAD9AQ99638 391 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 HIST1H2AJQ99878 128 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PAAF1Q9BRP4 392 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 NTPCRQ9BSD7 190 aaKnown RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 STRA6Q9BX79 667 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 AP1M1Q9BXS5 423 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CCDC68Q9H2F9 335 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PDCL3Q9H2J4 239 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FZD8Q9H461 694 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 GOLPH3LQ9H4A5 285 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CWH43Q9H720 699 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PLEKHA5Q9HAU0 1116 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 UPF2Q9HAU5 1272 aaKnown RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TUFT1Q9NNX1 390 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RGS18Q9NS28 235 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ANKEF1Q9NU02 776 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 HSPBP1Q9NZL4 362 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 KCMF1Q9P0J7 381 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 DPP7Q9UHL4 492 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ADAM29Q9UKF5 820 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MTUS1Q9ULD2 1270 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PCDHA7Q9UN72 937 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 SRPRBQ9Y5M8 271 aaKnown RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TRPV2Q9Y5S1 764 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MTCH2Q9Y6C9 303 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 SIP14410 1827 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MICAL3Q7RTP6 2002 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 F5P12259 2224 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 EP300Q09472 2414 aaPredicted RBP2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 LOXHD1Q8IVV2 1947 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZNF292O60281 2723 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 A0A1B0GUA9 196 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 A0A1W2PRX2 142 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PRSS38A1L453 326 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FRMD3A2A2Y4 597 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 GOLGA6L3A6NEY3 463 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 HIDE1A8MVS5 230 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 GOLGA6L6A8MZA4 724 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 NT5C1B-RDH14C9J2C7 533 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ANKRD63C9JTQ0 380 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PTGESO14684 152 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 SLC16A4O15374 487 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 NCAM2O15394 837 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 SLC16A6O15403 523 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ARHGAP6O43182 974 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 KLRC4O43908 158 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CUTAO60888 179 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 OPHN1O60890 802 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZNF623O75123 536 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TIPRLO75663 272 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 UBXN7O94888 489 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 BAG4O95429 457 aaKnown RBP2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ITGB1P05556 798 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PYGLP06737 847 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PFKMP08237 780 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CELA3BP08861 270 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PROZP22891 400 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 XPAP23025 273 aaPredicted RBP2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TNFSF4P23510 183 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 NMT1P30419 496 aaKnown RBP2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ATICP31939 592 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 KRT20P35900 424 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 STT3AP46977 705 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PAPOLAP51003 745 aaKnown RBP2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CASP5P51878 434 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZNF131P52739 623 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 POLGP54098 1239 aaPredicted RBP2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ATXN1P54253 815 aaKnown RBP2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 BPIFB4P59827 614 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RNASE9P60153 205 aaKnown RBP2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 APBA1Q02410 837 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TFF2Q03403 129 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ORC2Q13416 577 aaPredicted RBP2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 SPIDRQ14159 915 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CNN3Q15417 329 aaKnown RBP2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TBR1Q16650 682 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FAM187BQ17R55 369 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MUM1Q2TAK8 710 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 KRTAP19-4Q3LI73 84 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZC2HC1CQ53FD0 456 aaPredicted RBP2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ODF2Q5BJF6 829 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PITRM1Q5JRX3 1037 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FAM209BQ5JX69 171 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ARL6IP4Q66PJ3 421 aaKnown RBP2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TMEM200BQ69YZ2 307 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 LILRA6Q6PI73 481 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ALKAL1Q6UXT8 129 aa2.74□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TTLL10Q6ZVT0 673 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms