RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ITIH6Q6UXX5 1313 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 EDDM13A0A1B0GTR0 161 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 MED19A0JLT2 244 aaPredicted RBP14.65□□□□□ -0.06
UBE3B-206ENST00000536398 GOLGA6L19H0YKK7 550 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 K7ERQ8 282 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 DDX3XO00571 662 aaKnown RBP eCLIP14.65□□□□□ -0.061e-7■■■□□ 18.1
UBE3B-206ENST00000536398 CDX4O14627 284 aaPredicted RBP14.65□□□□□ -0.06
UBE3B-206ENST00000536398 TM4SF5O14894 197 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 MID1O15344 667 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 CCP110O43303 1012 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 DNTTP04053 509 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 CFIP05156 583 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 SDHBP21912 280 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 PRKCIP41743 596 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 METAP1P53582 386 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 OXCT1P55809 520 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 TPM4P67936 248 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 SULT2A1Q06520 285 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 SKOR2Q2VWA4 1001 aaPredicted RBP14.65□□□□□ -0.06
UBE3B-206ENST00000536398 DCAF12L1Q5VU92 463 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 ZNF776Q68DI1 518 aaPredicted RBP14.65□□□□□ -0.06
UBE3B-206ENST00000536398 STRADAQ7RTN6 431 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 OR7D4Q8NG98 312 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 EDEM3Q9BZQ6 932 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 PABPC3Q9H361 631 aaKnown RBP14.65□□□□□ -0.06
UBE3B-206ENST00000536398 FBRSQ9HAH7 460 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 NDFIP2Q9NV92 336 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 IFNKQ9P0W0 207 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 OR12D3Q9UGF7 316 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 EVLQ9UI08 416 aaPredicted RBP14.65□□□□□ -0.06
UBE3B-206ENST00000536398 VPS51Q9UID3 782 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 SLCO1B1Q9Y6L6 691 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 NUMA1Q14980 2115 aa14.65□□□□□ -0.06
UBE3B-206ENST00000536398 CEP192Q8TEP8 1941 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 A0A1W2PP55 124 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 TARSL2A2RTX5 802 aaKnown RBP14.64□□□□□ -0.07
UBE3B-206ENST00000536398 METTL12A8MUP2 240 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 MEI4A8MW99 385 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 PLK4O00444 970 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 FTLP02792 175 aaPredicted RBP14.64□□□□□ -0.07
UBE3B-206ENST00000536398 OR1E1P30953 314 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 SLC8A1P32418 973 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 MAPK8P45983 427 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 ZNF143P52747 638 aaPredicted RBP14.64□□□□□ -0.07
UBE3B-206ENST00000536398 KLHL30Q0D2K2 578 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 MAMLD1Q13495 774 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 DLG2Q15700 870 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 DUOXA1Q1HG43 343 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 ACCSLQ4AC99 568 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 FIGNQ5HY92 759 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 MANEALQ5VSG8 457 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 RWDD4Q6NW29 188 aaKnown RBP14.64□□□□□ -0.07
UBE3B-206ENST00000536398 SLC23A3Q6PIS1 610 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 LINGO4Q6UY18 593 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 ERMP1Q7Z2K6 904 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 PYROXD2Q8N2H3 581 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 CADM4Q8NFZ8 388 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 GANCQ8TET4 914 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 ZYG11BQ9C0D3 744 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 MIR1-1HGQ9H1L0 117 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 OSBPL2Q9H1P3 480 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 CAPN10Q9HC96 672 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 TMEM51Q9NW97 253 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 SLC6A14Q9UN76 642 aa14.64□□□□□ -0.07
UBE3B-206ENST00000536398 SMAD6O43541 496 aaKnown RBP14.63□□□□□ -0.07
UBE3B-206ENST00000536398 ATP9BO43861 1147 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 SEMA4FO95754 770 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 PLEKP08567 350 aaPredicted RBP14.63□□□□□ -0.07
UBE3B-206ENST00000536398 SERPINF2P08697 491 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 ENGP17813 658 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 NNMTP40261 264 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 PSMD8P48556 350 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 ZBTB16Q05516 673 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 CST6Q15828 149 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 ARL13BQ3SXY8 428 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 SYCP2LQ5T4T6 812 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 HGSNATQ68CP4 663 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 IL31Q6EBC2 164 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 SCYL2Q6P3W7 929 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 DCUN1D2Q6PH85 259 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 Q6ZVU0 165 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 SETD3Q86TU7 594 aaPredicted RBP14.63□□□□□ -0.07
UBE3B-206ENST00000536398 DRC7Q8IY82 874 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 SH2D3CQ8N5H7 860 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 AADATQ8N5Z0 425 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 OR2I1PQ8NGU4 316 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 DNASE2BQ8WZ79 361 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 FOXJ1Q92949 421 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 PPP1R9BQ96SB3 815 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 SPON2Q9BUD6 331 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 NUSAP1Q9BXS6 441 aaKnown RBP14.63□□□□□ -0.07
UBE3B-206ENST00000536398 TRIM7Q9C029 511 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 BTBD1Q9H0C5 482 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 NEUROG2Q9H2A3 272 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 TMEM9BQ9NQ34 198 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 FBXL12Q9NXK8 326 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 PPARGC1AQ9UBK2 798 aaKnown RBP14.63□□□□□ -0.07
UBE3B-206ENST00000536398 EIF2B4Q9UI10 523 aaKnown RBP14.63□□□□□ -0.07
UBE3B-206ENST00000536398 SLC25A13Q9UJS0 675 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 SARDHQ9UL12 918 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms