RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 MAPKAPK2P49137 400 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 VAV2P52735 878 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 HADHBP55084 474 aaKnown RBP13.9□□□□□ -0.18
RPAIN-205ENST00000536255 TPI1P60174 286 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 SULT2A1Q06520 285 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 MESDQ14696 234 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 ALFQ53S48 1182 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 FSCBQ5H9T9 825 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 MBLAC2Q68D91 279 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 LRRC8AQ8IWT6 810 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 CYB5D2Q8WUJ1 264 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 TEKT4Q8WW24 435 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 ERLEC1Q96DZ1 483 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 ZC3H10Q96K80 434 aaKnown RBP13.9□□□□□ -0.18
RPAIN-205ENST00000536255 SPACA7Q96KW9 195 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 ZWILCHQ9H900 591 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 MPP6Q9NZW5 540 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 INVSQ9Y283 1065 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 TBC1D30Q9Y2I9 924 aa13.9□□□□□ -0.18
RPAIN-205ENST00000536255 CFAP54Q96N23 3096 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 ZNF292O60281 2723 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 TMEM110-MUSTN1A8MSY1 372 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 BTNL10A8MVZ5 291 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 FAM72CH0Y354 149 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 SYNCRIPO60506 623 aaKnown RBP13.89□□□□□ -0.19
RPAIN-205ENST00000536255 CNTN5O94779 1100 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 EPHX1P07099 455 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 RHOCP08134 193 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 KRT7P08729 469 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 PRKCHP24723 683 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 ETFBP38117 255 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 ARL4AP40617 200 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 SLC25A11Q02978 314 aaKnown RBP13.89□□□□□ -0.19
RPAIN-205ENST00000536255 SEMA3BQ13214 749 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 BYSLQ13895 437 aaKnown RBP13.89□□□□□ -0.19
RPAIN-205ENST00000536255 ELF2Q15723 593 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 PTPRNQ16849 979 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 PLEKHG6Q3KR16 790 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 PLK5Q496M5 336 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 FNDC3BQ53EP0 1204 aaKnown RBP13.89□□□□□ -0.19
RPAIN-205ENST00000536255 FAM72AQ5TYM5 149 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 FAM72DQ6L9T8 149 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 CXorf57Q6NSI4 855 aaKnown RBP13.89□□□□□ -0.19
RPAIN-205ENST00000536255 ZNF783Q6ZMS7 281 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 TFAP2DQ7Z6R9 452 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 FAM72BQ86X60 149 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 PYROXD2Q8N2H3 581 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 ACRBPQ8NEB7 543 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 RLN3Q8WXF3 142 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 TTC17Q96AE7 1141 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 LOXL4Q96JB6 756 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 PEBP4Q96S96 227 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 MUC3BQ9H195 1237 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 DUSP15Q9H1R2 295 aaPredicted RBP13.89□□□□□ -0.19
RPAIN-205ENST00000536255 TMEM245Q9H330 911 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 TMEM248Q9NWD8 314 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 GPATCH2LQ9NWQ4 482 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 INTS6Q9UL03 887 aaKnown RBP13.89□□□□□ -0.19
RPAIN-205ENST00000536255 EML5Q05BV3 1969 aa13.89□□□□□ -0.19
RPAIN-205ENST00000536255 MUC22E2RYF6 1773 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-205ENST00000536255 MYO18AQ92614 2054 aaKnown RBP13.88□□□□□ -0.19
RPAIN-205ENST00000536255 ILVBLA1L0T0 632 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 H3BRJ5 948 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 EEF2KO00418 725 aaKnown RBP13.88□□□□□ -0.19
RPAIN-205ENST00000536255 PJA2O43164 708 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 DAPK3O43293 454 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 RHOBTB1O94844 696 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 EPN2O95208 641 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 PTMAP06454 111 aaKnown RBP13.88□□□□□ -0.19
RPAIN-205ENST00000536255 BCKDHBP21953 392 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 IL1R2P27930 398 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 CSKP41240 450 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 HCAR3P49019 387 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 IRAK1P51617 712 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 PLK1P53350 603 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 NAP1L1P55209 391 aaKnown RBP13.88□□□□□ -0.19
RPAIN-205ENST00000536255 ST8SIA6P61647 398 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 KIF5AQ12840 1032 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 DPYSL2Q16555 572 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 IFI16Q16666 785 aaKnown RBP13.88□□□□□ -0.19
RPAIN-205ENST00000536255 SMTNL2Q2TAL5 461 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 MAP7D1Q3KQU3 841 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 PPP6R3Q5H9R7 873 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-205ENST00000536255 PITRM1Q5JRX3 1037 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 KCNT1Q5JUK3 1230 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 DAB2IPQ5VWQ8 1189 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 RNF219Q5W0B1 726 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-205ENST00000536255 CYP4V2Q6ZWL3 525 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-205ENST00000536255 MAP7D3Q8IWC1 876 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 KIAA2013Q8IYS2 634 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 GPR161Q8N6U8 529 aaKnown RBP13.88□□□□□ -0.19
RPAIN-205ENST00000536255 HSPH1Q92598 858 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 MRGPRX1Q96LB2 322 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 FEM1AQ9BSK4 669 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 TSGA10Q9BZW7 698 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 SLC6A17Q9H1V8 727 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.88□□□□□ -0.19
RPAIN-205ENST00000536255 VPS28Q9UK41 221 aa13.88□□□□□ -0.19
RPAIN-205ENST00000536255 REXO2Q9Y3B8 237 aaKnown RBP13.88□□□□□ -0.19
RPAIN-205ENST00000536255 PTPRZ1P23471 2315 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms