RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 NRBP2Q9NSY0 501 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 RIC8BQ9NVN3 520 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 MIOSQ9NXC5 875 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 CACNG4Q9UBN1 327 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 DKK3Q9UBP4 350 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 ITGB1BP2Q9UKP3 347 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 MMP17Q9ULZ9 603 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 PLAAQ9Y263 795 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 FRMD4BQ9Y2L6 1034 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 VWA7Q9Y334 891 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 PCDHGB2Q9Y5G2 931 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 INSL5Q9Y5Q6 135 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 GOLGA4Q13439 2230 aaKnown RBP4.3□□□□□ -1.72
YBX3-205ENST00000536107 ABCA7Q8IZY2 2146 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 NFASCO94856 1347 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 FAM47E-STBD1D6RA91 191 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 ZNF185O15231 689 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 IPO8O15397 1037 aaKnown RBP4.29□□□□□ -1.72
YBX3-205ENST00000536107 KLF8O95600 359 aaPredicted RBP4.29□□□□□ -1.72
YBX3-205ENST00000536107 ARSAP15289 507 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 AKAP5P24588 427 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 SREBF1P36956 1147 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 ROR1Q01973 937 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 NCBP1Q09161 790 aaKnown RBP4.29□□□□□ -1.72
YBX3-205ENST00000536107 BFSP1Q12934 665 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 DNAJC3Q13217 504 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 LINC00303Q3SY05 128 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 CCDC178Q5BJE1 867 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 ABHD15Q6UXT9 468 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 KDM7AQ6ZMT4 941 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 MFSD6Q6ZSS7 791 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 ANKS3Q6ZW76 656 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 IQCA1Q86XH1 822 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 DGKHQ86XP1 1220 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 SLC41A1Q8IVJ1 513 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 ZNF654Q8IZM8 581 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 LSMEM2Q8N112 164 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 MMP21Q8N119 569 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 CPA6Q8N4T0 437 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 ALLCQ8N6M5 410 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 KBTBD3Q8NAB2 608 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 SSC4DQ8WTU2 575 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 FRAT1Q92837 279 aaPredicted RBP4.29□□□□□ -1.72
YBX3-205ENST00000536107 KIF1BPQ96EK5 621 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 VCPIP1Q96JH7 1222 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 FAM167AQ96KS9 214 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 SEC62Q99442 399 aaKnown RBP4.29□□□□□ -1.72
YBX3-205ENST00000536107 ZFYVE21Q9BQ24 234 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 PAAF1Q9BRP4 392 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 POLR3CQ9BUI4 534 aaPredicted RBP4.29□□□□□ -1.72
YBX3-205ENST00000536107 SLC25A18Q9H1K4 315 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 OR10A5Q9H207 317 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 LY9Q9HBG7 655 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 HPS4Q9NQG7 708 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 AGPAT5Q9NUQ2 364 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 OBP2AQ9NY56 170 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 SUCLA2Q9P2R7 463 aaPredicted RBP4.29□□□□□ -1.72
YBX3-205ENST00000536107 MTRRQ9UBK8 725 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 GABBR1Q9UBS5 961 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 CLCA2Q9UQC9 943 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 HES2Q9Y543 173 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 IPPQ9Y573 584 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 PCDHGA1Q9Y5H4 931 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 UBIAD1Q9Y5Z9 338 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 TSC2P49815 1807 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 CENPEQ02224 2701 aa4.29□□□□□ -1.72
YBX3-205ENST00000536107 CSMD1Q96PZ7 3565 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 BOD1L1Q8NFC6 3051 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 TLN1Q9Y490 2541 aaKnown RBP4.28□□□□□ -1.72
YBX3-205ENST00000536107 OTOGQ6ZRI0 2925 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 IGKV6D-21A0A0A0MT36 114 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 ESYT2A0FGR8 921 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 GJB6O95452 261 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 SEC24AO95486 1093 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 PRAMEF12O95522 483 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 LDOC1O95751 146 aaPredicted RBP4.28□□□□□ -1.72
YBX3-205ENST00000536107 CCNE2O96020 404 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 ZNF16P17020 682 aaPredicted RBP4.28□□□□□ -1.72
YBX3-205ENST00000536107 RBMS1P29558 406 aaKnown RBP4.28□□□□□ -1.72
YBX3-205ENST00000536107 GRIA2P42262 883 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 NASPP49321 788 aaPredicted RBP4.28□□□□□ -1.72
YBX3-205ENST00000536107 HAND2P61296 217 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 GABREP78334 506 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 IL9RQ01113 521 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 GRIK3Q13003 919 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 ITGB3BPQ13352 177 aaPredicted RBP4.28□□□□□ -1.72
YBX3-205ENST00000536107 DRP2Q13474 957 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 PDGFRLQ15198 375 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 EOGTQ5NDL2 527 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 C1QL3Q5VWW1 255 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 C6orf15Q6UXA7 325 aaPredicted RBP4.28□□□□□ -1.72
YBX3-205ENST00000536107 ZNF410Q86VK4 478 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 ZC3H7AQ8IWR0 971 aaKnown RBP4.28□□□□□ -1.72
YBX3-205ENST00000536107 TCEAL8Q8IYN2 117 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 NSUN7Q8NE18 718 aaKnown RBP4.28□□□□□ -1.72
YBX3-205ENST00000536107 WDR48Q8TAF3 677 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 ZNF564Q8TBZ8 553 aaPredicted RBP4.28□□□□□ -1.72
YBX3-205ENST00000536107 ARHGAP45Q92619 1136 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 ESR2Q92731 530 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 CNDP2Q96KP4 475 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms