RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 SDC3O75056 442 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 CALCAP01258 141 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ITPKBP27987 946 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 RXRGP48443 463 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 YWHAZP63104 245 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 CDK17Q00537 523 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 CCDC15Q0P6D6 951 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 MTA1Q13330 715 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 SYPL2Q5VXT5 272 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 KLHL10Q6JEL2 608 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 FBXL19Q6PCT2 694 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 BEND5Q7L4P6 421 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 CIR1Q86X95 450 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 DHTKD1Q96HY7 919 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 RPRD1AQ96P16 312 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ZSWIM1Q9BR11 485 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 DYRK4Q9NR20 520 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 EVA1BQ9NVM1 165 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 XPO7Q9UIA9 1087 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 VPS28Q9UK41 221 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 BICDL2A1A5D9 508 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 E5RJQ4 531 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 PRAMEF26H0Y7S4 382 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ALOX15BO15296 676 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 THAP12O43422 761 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 TLX3O43711 291 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 RTN2O75298 545 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 GABBR2O75899 941 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 LETM1O95202 739 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 FYNP06241 537 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ALPPL2P10696 532 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 GNA15P30679 374 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 CCR1P32246 355 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 DRD3P35462 400 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 GPD2P43304 727 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 E2F1Q01094 437 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 RTP5Q14D33 572 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 POM121L1PQ3SYA9 428 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 SFMBT2Q5VUG0 894 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 KDM7AQ6ZMT4 941 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 TRIM69Q86WT6 500 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ARHGEF19Q8IW93 802 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 SNIP1Q8TAD8 396 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 TSC1Q92574 1164 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ERCC4Q92889 916 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 FGF11Q92914 225 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 KLHDC7BQ96G42 594 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 LGMNQ99538 433 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 THAP9Q9H5L6 903 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 PREBQ9HCU5 417 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 DDIT4Q9NX09 232 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ZDHHC9Q9Y397 364 aa13.35□□□□□ -0.27
TNFRSF1A-207ENST00000535958 GCN1Q92616 2671 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 KNTC1P50748 2209 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ATXN7O15265 892 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 BRINP1O60477 761 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 RNGTTO60942 597 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 GNA14O95837 355 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 PRB1P04280 392 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 VAV1P15498 845 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ACP1P24666 158 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 CCDC173Q0VFZ6 552 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 CNTN1Q12860 1018 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ZNF177Q13360 481 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 MEA1Q16626 185 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 BROXQ5VW32 411 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ISM2Q6H9L7 571 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 DENND1BQ6P3S1 775 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 Q6ZVU0 165 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 GPR155Q7Z3F1 870 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 FMR1NBQ8N0W7 255 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 EHBP1Q8NDI1 1231 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 STK32AQ8WU08 396 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 NOX5Q96PH1 765 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 MYOCQ99972 504 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 MUC3BQ9H195 1237 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 PRORYQ9H606 182 aa13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.34□□□□□ -0.27
TNFRSF1A-207ENST00000535958 SHROOM3Q8TF72 1996 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 TEX51A0A1B0GUA7 166 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 KPNA3O00505 521 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 AFPP02771 609 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 THEGLP0DJG4 465 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 AKT2P31751 481 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 USP8P40818 1118 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 RPL34P49207 117 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 SNX16P57768 344 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CXADRP78310 365 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 KRT83P78385 493 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CENPCQ03188 943 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 KCNH2Q12809 1159 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PDCLQ13371 301 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 DLG2Q15700 870 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 TBC1D25Q3MII6 688 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 AGBL4Q5VU57 503 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ENOSF1Q7L5Y1 443 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 SPATS2Q86XZ4 545 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 LSM14AQ8ND56 463 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 FAM81BQ96LP2 452 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms