RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 PRAMEF26H0Y7S4 382 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 TLR4O00206 839 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 KPNA3O00505 521 aaPredicted RBP13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 ENC1O14682 589 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 RNGTTO60942 597 aaKnown RBP13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 RFPL3O75679 317 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 GABBR2O75899 941 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 PRNPP04156 253 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 IGHV4-34P06331 123 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 ALPPL2P10696 532 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 BMP6P22004 513 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 STK19P49842 368 aaPredicted RBP13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 CLCN6P51797 869 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 PLK1P53350 603 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 SYCP1Q15431 976 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 DLG2Q15700 870 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 ARL13BQ3SXY8 428 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 FAM102AQ5T9C2 384 aaPredicted RBP13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 RETSATQ6NUM9 610 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 FBXL22Q6P050 247 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 GJB7Q6PEY0 223 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 LAYNQ6UX15 382 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 DBX2Q6ZNG2 339 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 LRRC69Q6ZNQ3 347 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 FAM183BPQ6ZVS7 135 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 SLC26A9Q7LBE3 791 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 SLCO6A1Q86UG4 719 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 TMPRSS12Q86WS5 348 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 CIR1Q86X95 450 aaPredicted RBP13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 MFSD2AQ8NA29 543 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 ANKRD20A12PQ8NF67 263 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 SHC3Q92529 594 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 PTPRN2Q92932 1015 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 NXPE2Q96DL1 559 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 C18orf8Q96DM3 657 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 CPXM1Q96SM3 734 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 PREBQ9HCU5 417 aa13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 XPO7Q9UIA9 1087 aaKnown RBP13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 KMT2BQ9UMN6 2715 aaPredicted RBP13.61□□□□□ -0.23
CLSTN3-205ENST00000535452 MCF2LO15068 1137 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 GADD45BO75293 160 aaPredicted RBP13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 PAGE1O75459 146 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 ADCY5O95622 1261 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 IGLV3-25P01717 112 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 PON1P27169 355 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 OR1E1P30953 314 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 MAT2AP31153 395 aaKnown RBP13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 AKT2P31751 481 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 ETFBP38117 255 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 VASPP50552 380 aaPredicted RBP13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 DAB2P98082 770 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 BNC1Q01954 994 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 VWA3BQ502W6 1294 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 SETD3Q86TU7 594 aaPredicted RBP13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 IQCHQ86VS3 1027 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 BAHD1Q8TBE0 780 aaPredicted RBP13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 PIP4K2CQ8TBX8 421 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 KLHDC7BQ96G42 594 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 MYO19Q96H55 970 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 LMLNQ96KR4 655 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 FEM1AQ9BSK4 669 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 TKTL2Q9H0I9 626 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 NDST4Q9H3R1 872 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 ERVMER34-1Q9H9K5 563 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 SERGEFQ9UGK8 458 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 HPCAL4Q9UM19 191 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 HS3ST4Q9Y661 456 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 PCNX2A6NKB5 2137 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 CEP295Q9C0D2 2601 aa13.6□□□□□ -0.23
CLSTN3-205ENST00000535452 RRP8O43159 456 aaKnown RBP13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 ATP9BO43861 1147 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 PCDH8O95206 1070 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 GEMIN4P57678 1058 aaKnown RBP13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 CENPCQ03188 943 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 ILKQ13418 452 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 TAF5Q15542 800 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 NEK5Q6P3R8 708 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 DHRS13Q6UX07 377 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 Q6ZVU0 165 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 GATAD2AQ86YP4 633 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 AADATQ8N5Z0 425 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 EID2Q8N6I1 236 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 ZNF397Q8NF99 534 aaPredicted RBP13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 FAM174AQ8TBP5 190 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 FAM129BQ96TA1 746 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 TUBGCP2Q9BSJ2 902 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 SPON2Q9BUD6 331 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 ACP6Q9NPH0 428 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 BTBD3Q9Y2F9 522 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 AK5Q9Y6K8 562 aa13.59□□□□□ -0.23
CLSTN3-205ENST00000535452 ANKRD62A6NC57 917 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 NEMP2A6NFY4 417 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 PLRG1O43660 514 aaKnown RBP13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 SRGAP2O75044 1071 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 LSM8O95777 96 aaKnown RBP13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 ERCC5P28715 1186 aaPredicted RBP13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 EPHA8P29322 1005 aaPredicted RBP13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 NUMBP49757 651 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 DNA2P51530 1060 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 NXPH1P58417 271 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms