RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 AP5M1Q9H0R1 490 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 MARCH7Q9H992 704 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 PRM3Q9NNZ6 103 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 NR2E3Q9Y5X4 410 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 DMDP11532 3685 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 RRN3P2A6NIE6 340 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 E5RJQ4 531 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 I6L893 689 aaPredicted RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 TLR3O15455 904 aaKnown RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 SERPINB7O75635 380 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 TNNC2P02585 160 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 CD19P15391 556 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 PPARGP37231 505 aaPredicted RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 NSFP46459 744 aaKnown RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 YARSP54577 528 aaKnown RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 KRT17Q04695 432 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 INCA1Q0VD86 236 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 KLF1Q13351 362 aaPredicted RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 ZNF667Q5HYK9 610 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 KAZNQ674X7 775 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 ENOSF1Q7L5Y1 443 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 OTOAQ7RTW8 1153 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 SCUBE3Q8IX30 993 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 ZBED8Q8IZ13 594 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 VRTNQ9H8Y1 702 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 SIAEQ9HAT2 523 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 TSPAN16Q9UKR8 245 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 MRPL42Q9Y6G3 142 aaKnown RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 TOMM70O94826 608 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 T-ENOLP0DO92 83 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 RARBP10826 455 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 RARGP13631 454 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 NCF2P19878 526 aaPredicted RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 HMOX2P30519 316 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 THPOP40225 353 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 MAGEA4P43358 317 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 CRYBB1P53674 252 aaPredicted RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 VCPP55072 806 aaKnown RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 MRPS6P82932 125 aaKnown RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 SLC25A3Q00325 362 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 ANKRD20A4Q4UJ75 823 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 DHDDSQ86SQ9 333 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 ANKMY2Q8IV38 441 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 RHOT2Q8IXI1 618 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 CENPSQ8N2Z9 138 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 CCDC33Q8N5R6 958 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 BHMTQ93088 406 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 VWCEQ96DN2 955 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 SERPINB12Q96P63 405 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 CITED4Q96RK1 184 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 RTP3Q9BQQ7 232 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 CCDC68Q9H2F9 335 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 ASB7Q9H672 318 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 GRHL1Q9NZI5 618 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 TMCC2O75069 709 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 MFN2O95140 757 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 IL18RAPO95256 599 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 ZSCAN5DPP0CG00 497 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 TBXAS1P24557 533 aaPredicted RBP9.23□□□□□ -0.93
SF3B2-216ENST00000534765 CTNNA2P26232 953 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 RPA3P35244 121 aaPredicted RBP9.23□□□□□ -0.93
SF3B2-216ENST00000534765 NDUFV1P49821 464 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 GATMP50440 423 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 GAD2Q05329 585 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 PPP2R5EQ16537 467 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 NOTUMQ6P988 496 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 PRR23BQ6ZRT6 265 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 FAM183BPQ6ZVS7 135 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 GPRIN1Q7Z2K8 1008 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 STARD8Q92502 1023 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 AGAP3Q96P47 875 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 HNRNPABQ99729 332 aaKnown RBP9.23□□□□□ -0.93
SF3B2-216ENST00000534765 HAUS8Q9BT25 410 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 TRPV5Q9NQA5 729 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 PADI3Q9ULW8 664 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 PCDHGC3Q9UN70 934 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 GIT1Q9Y2X7 761 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 MFHAS1Q9Y4C4 1052 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 PTPRDP23468 1912 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 CASTOR2A6NHX0 329 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.23□□□□□ -0.93
SF3B2-216ENST00000534765 AGRPO00253 132 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 PODXLO00592 558 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 ADAM23O75077 832 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 LRCH4O75427 683 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 RALAP11233 206 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 EEF1B2P24534 225 aaKnown RBP9.23□□□□□ -0.93
SF3B2-216ENST00000534765 ADRA1DP25100 572 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 MAP4P27816 1152 aaKnown RBP9.23□□□□□ -0.93
SF3B2-216ENST00000534765 IFNA8P32881 189 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 SCNN1GP51170 649 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 RAP1GDS1P52306 607 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 SLC25A11Q02978 314 aaKnown RBP9.23□□□□□ -0.93
SF3B2-216ENST00000534765 MMRN1Q13201 1228 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 RGS21Q2M5E4 152 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 SMU1Q2TAY7 513 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 CGB2Q6NT52 195 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 LIMS2Q7Z4I7 341 aa9.23□□□□□ -0.93
SF3B2-216ENST00000534765 DIS3LQ8TF46 1054 aaKnown RBP9.23□□□□□ -0.93
SF3B2-216ENST00000534765 HEXIM2Q96MH2 286 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms