RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 PES1O00541 588 aaKnown RBP19■□□□□ 0.63
CTSB-233ENST00000534636 KCNK3O14649 394 aa19■□□□□ 0.63
CTSB-233ENST00000534636 YKT6O15498 198 aa19■□□□□ 0.63
CTSB-233ENST00000534636 CLDN11O75508 207 aa19■□□□□ 0.63
CTSB-233ENST00000534636 ATXN1LP0C7T5 689 aaKnown RBP19■□□□□ 0.63
CTSB-233ENST00000534636 TBC1D3HP0C7X1 549 aa19■□□□□ 0.63
CTSB-233ENST00000534636 CD38P28907 300 aa19■□□□□ 0.63
CTSB-233ENST00000534636 PLK1P53350 603 aa19■□□□□ 0.63
CTSB-233ENST00000534636 RAPGEF1Q13905 1077 aa19■□□□□ 0.63
CTSB-233ENST00000534636 PTPN20Q4JDL3 420 aa19■□□□□ 0.63
CTSB-233ENST00000534636 TBC1D3GQ6DHY5 549 aa19■□□□□ 0.63
CTSB-233ENST00000534636 TBC1D3CQ6IPX1 549 aa19■□□□□ 0.63
CTSB-233ENST00000534636 CXorf57Q6NSI4 855 aaKnown RBP19■□□□□ 0.63
CTSB-233ENST00000534636 SLC47A2Q86VL8 602 aa19■□□□□ 0.63
CTSB-233ENST00000534636 PROSER1Q86XN7 944 aa19■□□□□ 0.63
CTSB-233ENST00000534636 IRF2BP1Q8IU81 584 aa19■□□□□ 0.63
CTSB-233ENST00000534636 TBC1D3Q8IZP1 549 aaPredicted RBP19■□□□□ 0.63
CTSB-233ENST00000534636 GALNT15Q8N3T1 639 aa19■□□□□ 0.63
CTSB-233ENST00000534636 SERAC1Q96JX3 654 aa19■□□□□ 0.63
CTSB-233ENST00000534636 MUC3BQ9H195 1237 aa19■□□□□ 0.63
CTSB-233ENST00000534636 NDST4Q9H3R1 872 aa19■□□□□ 0.63
CTSB-233ENST00000534636 CCDC86Q9H6F5 360 aaKnown RBP19■□□□□ 0.63
CTSB-233ENST00000534636 GDF3Q9NR23 364 aa19■□□□□ 0.63
CTSB-233ENST00000534636 HS3ST4Q9Y661 456 aa19■□□□□ 0.63
CTSB-233ENST00000534636 LAMA5O15230 3695 aa19■□□□□ 0.63
CTSB-233ENST00000534636 APC2O95996 2303 aa18.99■□□□□ 0.63
CTSB-233ENST00000534636 SLC7A4O43246 635 aa18.99■□□□□ 0.63
CTSB-233ENST00000534636 PAGE1O75459 146 aa18.99■□□□□ 0.63
CTSB-233ENST00000534636 ZNF18P17022 549 aa18.99■□□□□ 0.63
CTSB-233ENST00000534636 VASPP50552 380 aaPredicted RBP18.99■□□□□ 0.63
CTSB-233ENST00000534636 CCDC157Q569K6 752 aa18.99■□□□□ 0.63
CTSB-233ENST00000534636 KCNT1Q5JUK3 1230 aa18.99■□□□□ 0.63
CTSB-233ENST00000534636 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.99■□□□□ 0.63
CTSB-233ENST00000534636 TMEM35BQ8NCS4 154 aa18.99■□□□□ 0.63
CTSB-233ENST00000534636 MSANTD4Q8NCY6 345 aa18.99■□□□□ 0.63
CTSB-233ENST00000534636 ZNF397Q8NF99 534 aaPredicted RBP18.99■□□□□ 0.63
CTSB-233ENST00000534636 CCDC114Q96M63 670 aa18.99■□□□□ 0.63
CTSB-233ENST00000534636 ELF4Q99607 663 aaPredicted RBP18.99■□□□□ 0.63
CTSB-233ENST00000534636 SIK2Q9H0K1 926 aa18.99■□□□□ 0.63
CTSB-233ENST00000534636 SIX2Q9NPC8 291 aa18.99■□□□□ 0.63
CTSB-233ENST00000534636 TMEM51Q9NW97 253 aa18.99■□□□□ 0.63
CTSB-233ENST00000534636 TOR4AQ9NXH8 423 aa18.99■□□□□ 0.63
CTSB-233ENST00000534636 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.99■□□□□ 0.63
CTSB-233ENST00000534636 RALYQ9UKM9 306 aaKnown RBP18.99■□□□□ 0.63
CTSB-233ENST00000534636 FARP1Q9Y4F1 1045 aaPredicted RBP18.99■□□□□ 0.63
CTSB-233ENST00000534636 A0A1B0GTQ1 180 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 FOXN3O00409 490 aaPredicted RBP18.98■□□□□ 0.63
CTSB-233ENST00000534636 ALOX15BO15296 676 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 PNMA6AP0CW24 399 aaPredicted RBP18.98■□□□□ 0.63
CTSB-233ENST00000534636 VAV1P15498 845 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 CLCN1P35523 988 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 NUDT1P36639 197 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 GGCXP38435 758 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 ARRB1P49407 418 aaPredicted RBP18.98■□□□□ 0.63
CTSB-233ENST00000534636 SULT1E1P49888 294 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 CDH4P55283 916 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 KRT83P78385 493 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 VWA3BQ502W6 1294 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 BRMS1LQ5PSV4 323 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 PRPF39Q86UA1 669 aaKnown RBP18.98■□□□□ 0.63
CTSB-233ENST00000534636 FRS2Q8WU20 508 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 TUBGCP2Q9BSJ2 902 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 FEM1AQ9BSK4 669 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 KDM4CQ9H3R0 1056 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 CLSTN2Q9H4D0 955 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 WDCPQ9H6R7 721 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 PLCB1Q9NQ66 1216 aa18.98■□□□□ 0.63
CTSB-233ENST00000534636 AJAP1Q9UKB5 411 aaPredicted RBP18.98■□□□□ 0.63
CTSB-233ENST00000534636 COL5A1P20908 1838 aaPredicted RBP18.97■□□□□ 0.63
CTSB-233ENST00000534636 KNTC1P50748 2209 aa18.97■□□□□ 0.63
CTSB-233ENST00000534636 ATP9BO43861 1147 aa18.97■□□□□ 0.63
CTSB-233ENST00000534636 F9P00740 461 aa18.97■□□□□ 0.63
CTSB-233ENST00000534636 ITGAVP06756 1048 aa18.97■□□□□ 0.63
CTSB-233ENST00000534636 RHOCP08134 193 aa18.97■□□□□ 0.63
CTSB-233ENST00000534636 RNASE9P60153 205 aaKnown RBP18.97■□□□□ 0.63
CTSB-233ENST00000534636 KCNJ12Q14500 433 aa18.97■□□□□ 0.63
CTSB-233ENST00000534636 ACBD5Q5T8D3 534 aaPredicted RBP18.97■□□□□ 0.63
CTSB-233ENST00000534636 FAM102AQ5T9C2 384 aaPredicted RBP18.97■□□□□ 0.63
CTSB-233ENST00000534636 NAPEPLDQ6IQ20 393 aa18.97■□□□□ 0.63
CTSB-233ENST00000534636 LRRC31Q6UY01 552 aa18.97■□□□□ 0.63
CTSB-233ENST00000534636 Q6ZVU0 165 aa18.97■□□□□ 0.63
CTSB-233ENST00000534636 TMPRSS7Q7RTY8 843 aa18.97■□□□□ 0.63
CTSB-233ENST00000534636 FAM71AQ8IYT1 594 aa18.97■□□□□ 0.63
CTSB-233ENST00000534636 OXR1Q8N573 874 aa18.97■□□□□ 0.63
CTSB-233ENST00000534636 C2orf49Q9BVC5 232 aaPredicted RBP18.97■□□□□ 0.63
CTSB-233ENST00000534636 TKTL2Q9H0I9 626 aa18.97■□□□□ 0.63
CTSB-233ENST00000534636 PIGVQ9NUD9 493 aa18.97■□□□□ 0.63
CTSB-233ENST00000534636 CHMP5Q9NZZ3 219 aa18.97■□□□□ 0.63
CTSB-233ENST00000534636 BNIP3LO60238 219 aa18.96■□□□□ 0.63
CTSB-233ENST00000534636 MAGEC1O60732 1142 aa18.96■□□□□ 0.63
CTSB-233ENST00000534636 DKK1O94907 266 aa18.96■□□□□ 0.63
CTSB-233ENST00000534636 WNT1P04628 370 aa18.96■□□□□ 0.63
CTSB-233ENST00000534636 ERCC5P28715 1186 aaPredicted RBP18.96■□□□□ 0.63
CTSB-233ENST00000534636 DRD3P35462 400 aa18.96■□□□□ 0.63
CTSB-233ENST00000534636 PPP2CBP62714 309 aa18.96■□□□□ 0.63
CTSB-233ENST00000534636 PPP2CAP67775 309 aa18.96■□□□□ 0.63
CTSB-233ENST00000534636 DEUP1Q05D60 604 aa18.96■□□□□ 0.63
CTSB-233ENST00000534636 DLG2Q15700 870 aa18.96■□□□□ 0.63
CTSB-233ENST00000534636 DPCR1Q3MIW9 517 aa18.96■□□□□ 0.63
CTSB-233ENST00000534636 SH2D3CQ8N5H7 860 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms