RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 GUSBP11Q6P575 273 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 ANKRD52Q8NB46 1076 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 HJURPQ8NCD3 748 aaPredicted RBP12.7□□□□□ -0.38
SVIP-205ENST00000533774 RNF139Q8WU17 664 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 FRS2Q8WU20 508 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 PTCD2Q8WV60 388 aaKnown RBP12.7□□□□□ -0.38
SVIP-205ENST00000533774 DHX58Q96C10 678 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 CCDC97Q96F63 343 aaPredicted RBP12.7□□□□□ -0.38
SVIP-205ENST00000533774 NIF3L1Q9GZT8 377 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 NUCKS1Q9H1E3 243 aaKnown RBP12.7□□□□□ -0.38
SVIP-205ENST00000533774 ATXN7L1Q9ULK2 861 aaPredicted RBP12.7□□□□□ -0.38
SVIP-205ENST00000533774 MORC2Q9Y6X9 1032 aaPredicted RBP12.7□□□□□ -0.38
SVIP-205ENST00000533774 CLEC18AA5D8T8 446 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 IKBKBO14920 756 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 SCAMP1O15126 338 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 TNFSF15O95150 251 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 TRIM49P0CI25 452 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 TRIM49CP0CI26 452 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 GCLMP48507 274 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 DUSP3P51452 185 aaPredicted RBP12.69□□□□□ -0.38
SVIP-205ENST00000533774 CLDN2P57739 230 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 SETMARQ53H47 684 aaPredicted RBP12.69□□□□□ -0.38
SVIP-205ENST00000533774 PERM1Q5SV97 790 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 MSANTD2Q6P1R3 559 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 CLEC18BQ6UXF7 455 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 SLC9A9Q8IVB4 645 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 CLEC18CQ8NCF0 446 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 LRRC27Q9C0I9 530 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 KCTD10Q9H3F6 313 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 KDM4CQ9H3R0 1056 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 LRRK1Q38SD2 2015 aa12.69□□□□□ -0.38
SVIP-205ENST00000533774 CREBBPQ92793 2442 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 CPED1A4D0V7 1026 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 RNF103O00237 685 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 XPO1O14980 1071 aaKnown RBP12.68□□□□□ -0.38
SVIP-205ENST00000533774 IRAK2O43187 625 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 RNGTTO60942 597 aaKnown RBP12.68□□□□□ -0.38
SVIP-205ENST00000533774 TRIM21P19474 475 aaKnown RBP12.68□□□□□ -0.38
SVIP-205ENST00000533774 CR2P20023 1033 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 NUDT1P36639 197 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 DAOAP59103 153 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 STK4Q13043 487 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 CUL4BQ13620 913 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 ELAVL3Q14576 367 aaKnown RBP12.68□□□□□ -0.38
SVIP-205ENST00000533774 GOLGA7BQ2TAP0 167 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 HS1BP3Q53T59 392 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 SGO2Q562F6 1265 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 DCAF6Q58WW2 860 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 GCNT7Q6ZNI0 430 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 EFL1Q7Z2Z2 1120 aaKnown RBP12.68□□□□□ -0.38
SVIP-205ENST00000533774 KIAA0895Q8NCT3 520 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 TMEM174Q8WUU8 243 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 SEMA4DQ92854 862 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 SGF29Q96ES7 293 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 FCRL2Q96LA5 508 aaPredicted RBP12.68□□□□□ -0.38
SVIP-205ENST00000533774 CALN1Q9BXU9 219 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
SVIP-205ENST00000533774 ABCC13Q9NSE7 274 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 XPO7Q9UIA9 1087 aaKnown RBP12.68□□□□□ -0.38
SVIP-205ENST00000533774 KLF15Q9UIH9 416 aa12.68□□□□□ -0.38
SVIP-205ENST00000533774 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.67□□□□□ -0.38
SVIP-205ENST00000533774 SLC7A4O43246 635 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 KLRC4O43908 158 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 LUC7L3O95232 432 aaKnown RBP12.67□□□□□ -0.38
SVIP-205ENST00000533774 NR3C1P04150 777 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 WT1P19544 449 aaPredicted RBP12.67□□□□□ -0.38
SVIP-205ENST00000533774 SLC11A2P49281 568 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 TBX4P57082 545 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 AMPD3Q01432 767 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 ZNF177Q13360 481 aaPredicted RBP12.67□□□□□ -0.38
SVIP-205ENST00000533774 CDH18Q13634 790 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 RABEP1Q15276 862 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 ZNF284Q2VY69 593 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 MS4A13Q5J8X5 152 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 PIP5KL1Q5T9C9 394 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 HIST2H2BCQ6DN03 193 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 SMYD5Q6GMV2 418 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 OR6B2Q6IFH4 312 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 RBM44Q6ZP01 1051 aaKnown RBP12.67□□□□□ -0.38
SVIP-205ENST00000533774 USP53Q70EK8 1073 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 GRAMD1CQ8IYS0 662 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 WDR36Q8NI36 951 aaKnown RBP12.67□□□□□ -0.38
SVIP-205ENST00000533774 UBA3Q8TBC4 463 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 CLEC4CQ8WTT0 213 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 AZIN2Q96A70 460 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 SPAG5Q96R06 1193 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 SEMA3CQ99985 751 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 CUEDC2Q9H467 287 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 USP29Q9HBJ7 922 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 LRRC4Q9HBW1 653 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 CISHQ9NSE2 258 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 TSPAN16Q9UKR8 245 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 PPM1HQ9ULR3 514 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 ZFR2Q9UPR6 939 aaKnown RBP12.67□□□□□ -0.38
SVIP-205ENST00000533774 SDK2Q58EX2 2172 aa12.67□□□□□ -0.38
SVIP-205ENST00000533774 ITPR2Q14571 2701 aa12.66□□□□□ -0.38
SVIP-205ENST00000533774 A0A1W2PQU0 124 aa12.66□□□□□ -0.38
SVIP-205ENST00000533774 EME2A4GXA9 379 aaPredicted RBP12.66□□□□□ -0.38
SVIP-205ENST00000533774 PIK3R2O00459 728 aa12.66□□□□□ -0.38
SVIP-205ENST00000533774 EIF5BO60841 1220 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms