RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 HEY1Q9Y5J3 304 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 DOCK4Q8N1I0 1966 aa12.21□□□□□ -0.46
COMMD9-208ENST00000533643 TICRRQ7Z2Z1 1910 aa12.21□□□□□ -0.46
COMMD9-208ENST00000533643 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.2□□□□□ -0.46
COMMD9-208ENST00000533643 APOC4-APOC2K7ER74 178 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 DFFAO00273 331 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 MAP3K6O95382 1288 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 APOC2P02655 101 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 PABPC1P11940 636 aaKnown RBP12.2□□□□□ -0.46
COMMD9-208ENST00000533643 GRIA2P42262 883 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 NR2C2P49116 596 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 NUMBP49757 651 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 PAPOLAP51003 745 aaKnown RBP12.2□□□□□ -0.46
COMMD9-208ENST00000533643 GALNT2Q10471 571 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 SERINC3Q13530 473 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 DMC1Q14565 340 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 SIX1Q15475 284 aaPredicted RBP12.2□□□□□ -0.46
COMMD9-208ENST00000533643 MLF2Q15773 248 aaPredicted RBP12.2□□□□□ -0.46
COMMD9-208ENST00000533643 GEN1Q17RS7 908 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 LONRF2Q1L5Z9 754 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 PLEKHG6Q3KR16 790 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 FUT11Q495W5 492 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 PITRM1Q5JRX3 1037 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 CCDC181Q5TID7 509 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 TMEM215Q68D42 235 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 ARHGAP36Q6ZRI8 547 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 ADIPOR2Q86V24 386 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 CREG2Q8IUH2 290 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 SFTPA1Q8IWL2 248 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 ACTRT1Q8TDG2 376 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 ARHGEF2Q92974 986 aaKnown RBP12.2□□□□□ -0.46
COMMD9-208ENST00000533643 HAUS1Q96CS2 278 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 CAPZA3Q96KX2 299 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 OLFM3Q96PB7 478 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 P2RY13Q9BPV8 354 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 SPON2Q9BUD6 331 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 WNT16Q9UBV4 365 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 VPS28Q9UK41 221 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 CA14Q9ULX7 337 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 RAD54BQ9Y620 910 aa12.2□□□□□ -0.46
COMMD9-208ENST00000533643 A0A0A0MRY4 1105 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 KRBA1A5PL33 1030 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 ARHGAP42A6NI28 874 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 PGRMC1O00264 195 aaKnown RBP12.19□□□□□ -0.46
COMMD9-208ENST00000533643 PDE2AO00408 941 aaPredicted RBP12.19□□□□□ -0.46
COMMD9-208ENST00000533643 KDELR3O43731 214 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 SNAP91O60641 907 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 ZMPSTE24O75844 475 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 URI1O94763 535 aaPredicted RBP12.19□□□□□ -0.46
COMMD9-208ENST00000533643 KAT7O95251 611 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 GLDCP23378 1020 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 ETFBP38117 255 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 OTUD4Q01804 1114 aaKnown RBP12.19□□□□□ -0.46
COMMD9-208ENST00000533643 NOMO1Q15155 1222 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 PON2Q15165 354 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 IL31Q6EBC2 164 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 TPRG1Q6ZUI0 275 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 LRRC49Q8IUZ0 686 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 TERB1Q8NA31 727 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 KIF18AQ8NI77 898 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 ACTL9Q8TC94 416 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 WFIKKN2Q8TEU8 576 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 LRRN4Q8WUT4 740 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 MAIP1Q8WWC4 291 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 P3H4Q92791 437 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 TTC17Q96AE7 1141 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 MSANTD3Q96H12 275 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 UHRF1Q96T88 793 aaPredicted RBP12.19□□□□□ -0.46
COMMD9-208ENST00000533643 FAM118BQ9BPY3 351 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 ATP13A1Q9HD20 1204 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 ARHGEF3Q9NR81 526 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 VPS51Q9UID3 782 aa12.19□□□□□ -0.46
COMMD9-208ENST00000533643 TRIOO75962 3097 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 TBC1D3BA6NDS4 549 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 PRRT4C9JH25 899 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 J3KR12 359 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 MAN2B1O00754 1011 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 NCAM2O15394 837 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 MAFKO60675 156 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 APODP05090 189 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 POLR2EP19388 210 aaKnown RBP12.18□□□□□ -0.46
COMMD9-208ENST00000533643 MX2P20592 715 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 CD72P21854 359 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 GARSP41250 739 aaKnown RBP12.18□□□□□ -0.46
COMMD9-208ENST00000533643 CTSOP43234 321 aaPredicted RBP12.18□□□□□ -0.46
COMMD9-208ENST00000533643 ZXDAP98168 799 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 PRKCQQ04759 706 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 PDK1Q15118 436 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 PREPLQ4J6C6 727 aaPredicted RBP12.18□□□□□ -0.46
COMMD9-208ENST00000533643 TMEM196Q5HYL7 178 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 MBLAC2Q68D91 279 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 FSTL4Q6MZW2 842 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 B4GALNT4Q76KP1 1039 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 BZW1Q7L1Q6 419 aaKnown RBP12.18□□□□□ -0.46
COMMD9-208ENST00000533643 ZNF354CQ86Y25 554 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 SUGP1Q8IWZ8 645 aaKnown RBP12.18□□□□□ -0.46
COMMD9-208ENST00000533643 AHI1Q8N157 1196 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 ATPAF2Q8N5M1 289 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 DCAF4L2Q8NA75 395 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 TTC13Q8NBP0 860 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms