RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 RETSATQ6NUM9 610 aa21.5■■□□□ 1.03
VPS51-211ENST00000533487 METTL3Q86U44 580 aaKnown RBP21.5■■□□□ 1.03
VPS51-211ENST00000533487 TMEM139Q8IV31 216 aa21.5■■□□□ 1.03
VPS51-211ENST00000533487 APCDD1Q8J025 514 aa21.5■■□□□ 1.03
VPS51-211ENST00000533487 LZTR1Q8N653 840 aa21.5■■□□□ 1.03
VPS51-211ENST00000533487 HHIPQ96QV1 700 aa21.5■■□□□ 1.03
VPS51-211ENST00000533487 CD248Q9HCU0 757 aa21.5■■□□□ 1.03
VPS51-211ENST00000533487 OSGEPQ9NPF4 335 aa21.5■■□□□ 1.03
VPS51-211ENST00000533487 HS3ST2Q9Y278 367 aa21.5■■□□□ 1.03
VPS51-211ENST00000533487 ZSCAN5CA6NGD5 496 aaPredicted RBP21.49■■□□□ 1.03
VPS51-211ENST00000533487 H3BRJ5 948 aa21.49■■□□□ 1.03
VPS51-211ENST00000533487 RAMP2O60895 175 aa21.49■■□□□ 1.03
VPS51-211ENST00000533487 HNRNPA1L2Q32P51 320 aaKnown RBP21.49■■□□□ 1.03
VPS51-211ENST00000533487 PARP15Q460N3 678 aa21.49■■□□□ 1.03
VPS51-211ENST00000533487 LRRC38Q5VT99 294 aa21.49■■□□□ 1.03
VPS51-211ENST00000533487 TSSK4Q6SA08 328 aa21.49■■□□□ 1.03
VPS51-211ENST00000533487 VSIG1Q86XK7 387 aa21.49■■□□□ 1.03
VPS51-211ENST00000533487 MAP7D3Q8IWC1 876 aa21.49■■□□□ 1.03
VPS51-211ENST00000533487 UMODL1-AS1Q8N2C9 162 aa21.49■■□□□ 1.03
VPS51-211ENST00000533487 PYROXD2Q8N2H3 581 aa21.49■■□□□ 1.03
VPS51-211ENST00000533487 FAM71BQ8TC56 605 aa21.49■■□□□ 1.03
VPS51-211ENST00000533487 CYB5D2Q8WUJ1 264 aa21.49■■□□□ 1.03
VPS51-211ENST00000533487 ANP32BQ92688 251 aaKnown RBP21.49■■□□□ 1.03
VPS51-211ENST00000533487 BTBD6Q96KE9 485 aa21.49■■□□□ 1.03
VPS51-211ENST00000533487 MRGPRX3Q96LB0 322 aa21.49■■□□□ 1.03
VPS51-211ENST00000533487 HPCAL4Q9UM19 191 aa21.49■■□□□ 1.03
VPS51-211ENST00000533487 EDDM13A0A1B0GTR0 161 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 TCRBV21S2A2A0A5A6 115 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 DAPK3O43293 454 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 ZNF217O75362 1048 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 EPHX1P07099 455 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 RARAP10276 462 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 IL1R2P27930 398 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 VAV2P52735 878 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 NDST2P52849 883 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 NHLH1Q02575 133 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 ZBTB16Q05516 673 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 SFSWAPQ12872 951 aaKnown RBP21.48■■□□□ 1.03
VPS51-211ENST00000533487 PDK2Q15119 407 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 USP39Q53GS9 565 aaKnown RBP21.48■■□□□ 1.03
VPS51-211ENST00000533487 RAD9BQ6WBX8 426 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 RFX8Q6ZV50 586 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 SORCS1Q8WY21 1168 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 MYO19Q96H55 970 aa21.48■■□□□ 1.03
VPS51-211ENST00000533487 ACE2Q9BYF1 805 aaPredicted RBP21.48■■□□□ 1.03
VPS51-211ENST00000533487 BCCIPQ9P287 314 aaKnown RBP eCLIP21.48■■□□□ 1.03
VPS51-211ENST00000533487 EML5Q05BV3 1969 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 ANTXRLA6NF34 631 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 ZNF487B1APH4 448 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 PJA2O43164 708 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 ATP9BO43861 1147 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 PRKCHP24723 683 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 FNTBP49356 437 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 MESDQ14696 234 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 POLD3Q15054 466 aaPredicted RBP21.47■■□□□ 1.03
VPS51-211ENST00000533487 PPP6R3Q5H9R7 873 aaPredicted RBP21.47■■□□□ 1.03
VPS51-211ENST00000533487 ANO7Q6IWH7 933 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 OR52K2Q8NGK3 314 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 OR2T3Q8NH03 318 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 UBE2Q2Q8WVN8 375 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 GAB3Q8WWW8 586 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 CASKIN2Q8WXE0 1202 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 KCTD15Q96SI1 283 aaPredicted RBP21.47■■□□□ 1.03
VPS51-211ENST00000533487 PRDM16Q9HAZ2 1276 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 ATP13A1Q9HD20 1204 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.47■■□□□ 1.03
VPS51-211ENST00000533487 SCML1Q9UN30 329 aa21.47■■□□□ 1.03
VPS51-211ENST00000533487 NYNRINQ9P2P1 1898 aaKnown RBP21.47■■□□□ 1.03
VPS51-211ENST00000533487 WASH3PC4AMC7 463 aa21.46■■□□□ 1.03
VPS51-211ENST00000533487 ARHGAP6O43182 974 aa21.46■■□□□ 1.03
VPS51-211ENST00000533487 WASP42768 502 aa21.46■■□□□ 1.03
VPS51-211ENST00000533487 SSR1P43307 286 aaKnown RBP21.46■■□□□ 1.03
VPS51-211ENST00000533487 NOP2P46087 812 aaKnown RBP21.46■■□□□ 1.03
VPS51-211ENST00000533487 IFI16Q16666 785 aaKnown RBP21.46■■□□□ 1.03
VPS51-211ENST00000533487 CA9Q16790 459 aa21.46■■□□□ 1.03
VPS51-211ENST00000533487 SH2D3CQ8N5H7 860 aa21.46■■□□□ 1.03
VPS51-211ENST00000533487 MDGA1Q8NFP4 955 aa21.46■■□□□ 1.03
VPS51-211ENST00000533487 ARHGEF2Q92974 986 aaKnown RBP21.46■■□□□ 1.03
VPS51-211ENST00000533487 CCDC114Q96M63 670 aa21.46■■□□□ 1.03
VPS51-211ENST00000533487 PSMB7Q99436 277 aa21.46■■□□□ 1.03
VPS51-211ENST00000533487 MAGEB5Q9BZ81 275 aa21.46■■□□□ 1.03
VPS51-211ENST00000533487 CEP44Q9C0F1 390 aa21.46■■□□□ 1.03
VPS51-211ENST00000533487 ZDHHC4Q9NPG8 344 aa21.46■■□□□ 1.03
VPS51-211ENST00000533487 GPATCH2LQ9NWQ4 482 aa21.46■■□□□ 1.03
VPS51-211ENST00000533487 DNAI1Q9UI46 699 aa21.46■■□□□ 1.03
VPS51-211ENST00000533487 VPS51Q9UID3 782 aa21.46■■□□□ 1.03
VPS51-211ENST00000533487 A0A0D9SEW6 157 aa21.45■■□□□ 1.02
VPS51-211ENST00000533487 ALOX15BO15296 676 aa21.45■■□□□ 1.02
VPS51-211ENST00000533487 RNASEH1O60930 286 aaKnown RBP21.45■■□□□ 1.02
VPS51-211ENST00000533487 GOT1P17174 413 aa21.45■■□□□ 1.02
VPS51-211ENST00000533487 GABRG2P18507 467 aa21.45■■□□□ 1.02
VPS51-211ENST00000533487 DPYSQ14117 519 aa21.45■■□□□ 1.02
VPS51-211ENST00000533487 KCNT1Q5JUK3 1230 aa21.45■■□□□ 1.02
VPS51-211ENST00000533487 IL31Q6EBC2 164 aa21.45■■□□□ 1.02
VPS51-211ENST00000533487 C11orf63Q6NUN7 778 aa21.45■■□□□ 1.02
VPS51-211ENST00000533487 KIAA1328Q86T90 577 aa21.45■■□□□ 1.02
VPS51-211ENST00000533487 HMGB4Q8WW32 186 aa21.45■■□□□ 1.02
VPS51-211ENST00000533487 HSPH1Q92598 858 aa21.45■■□□□ 1.02
VPS51-211ENST00000533487 SPACA7Q96KW9 195 aa21.45■■□□□ 1.02
VPS51-211ENST00000533487 MRGPRX1Q96LB2 322 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms