RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 SERPINB11Q96P15 392 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 DEFB118Q96PH6 123 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 CDRT15Q96T59 188 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 NMUR2Q9GZQ4 415 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 YY1AP1Q9H869 796 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 CDHR5Q9HBB8 845 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 C2orf81A6NN90 581 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 ZNF189O75820 626 aaPredicted RBP12.65□□□□□ -0.38
RAD50-209ENST00000533482 ITGA2BP08514 1039 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 HIST1H2AGP0C0S8 130 aaPredicted RBP12.65□□□□□ -0.38
RAD50-209ENST00000533482 SPATA31D3P0C874 917 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 ATP4AP20648 1035 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 HIST1H2ADP20671 130 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 MSX2P35548 267 aaPredicted RBP12.65□□□□□ -0.38
RAD50-209ENST00000533482 PBX3P40426 434 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 NOVP48745 357 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 RENBPP51606 427 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 WDR4P57081 412 aaKnown RBP12.65□□□□□ -0.38
RAD50-209ENST00000533482 PTK2BQ14289 1009 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 NOMO2Q5JPE7 1267 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 WASHC2DQ5SRD0 308 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 CERCAMQ5T4B2 595 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 VSTM1Q6UX27 236 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 SPATA31D4Q6ZUB0 917 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 TMEM130Q8N3G9 435 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 HIST1H2AHQ96KK5 128 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 CPNE1Q99829 537 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 HIST1H2AJQ99878 128 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 H2AFJQ9BTM1 129 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 GPR88Q9GZN0 384 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 SAR1AQ9NR31 198 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 SNX10Q9Y5X0 201 aa12.65□□□□□ -0.38
RAD50-209ENST00000533482 PPM1JQ5JR12 505 aa12.65□□□□□ -0.39
RAD50-209ENST00000533482 TRMT10BQ6PF06 316 aaKnown RBP12.65□□□□□ -0.39
RAD50-209ENST00000533482 ELMSAN1Q6PJG2 1045 aa12.65□□□□□ -0.39
RAD50-209ENST00000533482 ZC3H3Q8IXZ2 948 aaKnown RBP12.65□□□□□ -0.39
RAD50-209ENST00000533482 OLFM3Q96PB7 478 aa12.65□□□□□ -0.39
RAD50-209ENST00000533482 KLHL5Q96PQ7 755 aa12.65□□□□□ -0.39
RAD50-209ENST00000533482 NDNQ99608 321 aa12.65□□□□□ -0.39
RAD50-209ENST00000533482 ADNPQ9H2P0 1102 aa12.65□□□□□ -0.39
RAD50-209ENST00000533482 TRMT13Q9NUP7 481 aaKnown RBP12.65□□□□□ -0.39
RAD50-209ENST00000533482 RNF112Q9ULX5 631 aa12.65□□□□□ -0.39
RAD50-209ENST00000533482 HACD1B0YJ81 288 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 NR5A2O00482 541 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 SERPIND1P05546 499 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 TBCCQ15814 346 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 SPANXN3Q5MJ09 141 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 NOL9Q5SY16 702 aaKnown RBP12.64□□□□□ -0.39
RAD50-209ENST00000533482 C1orf220Q5T0J3 134 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 CYP2R1Q6VVX0 501 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 KYAT3Q6YP21 454 aaKnown RBP12.64□□□□□ -0.39
RAD50-209ENST00000533482 SETD3Q86TU7 594 aaPredicted RBP12.64□□□□□ -0.39
RAD50-209ENST00000533482 DUSP16Q9BY84 665 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 TM6SF2Q9BZW4 377 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 EEF1DP29692 281 aaKnown RBP12.64□□□□□ -0.39
RAD50-209ENST00000533482 INPP5AQ14642 412 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 NEPROQ6NW34 567 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 LRRC74BQ6ZQY2 392 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 MFN1Q8IWA4 741 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 KYQ8NBH2 561 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 NPLOC4Q8TAT6 608 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 PNPOQ9NVS9 261 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 KCNK4Q9NYG8 393 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 MYH14Q7Z406 1995 aaKnown RBP12.64□□□□□ -0.39
RAD50-209ENST00000533482 MFSD11O43934 449 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 ASPAP45381 313 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 PTDSS1P48651 473 aaKnown RBP12.64□□□□□ -0.39
RAD50-209ENST00000533482 FKBP1BP68106 108 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 TTC23LQ6PF05 361 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 SLC41A1Q8IVJ1 513 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 CLEC4FQ8N1N0 589 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 CFAP52Q8N1V2 620 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 PCDH20Q8N6Y1 951 aaKnown RBP12.64□□□□□ -0.39
RAD50-209ENST00000533482 CCDC185Q8N715 623 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 PCDH19Q8TAB3 1148 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 SLC44A1Q8WWI5 657 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 SCUBE2Q9NQ36 999 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 TRMT6Q9UJA5 497 aaKnown RBP12.64□□□□□ -0.39
RAD50-209ENST00000533482 CDH9Q9ULB4 789 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 PCDHGC3Q9UN70 934 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 FAM50BQ9Y247 325 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 MYH6P13533 1939 aa12.64□□□□□ -0.39
RAD50-209ENST00000533482 PRR5-ARHGAP8B1AHC4 643 aa12.63□□□□□ -0.39
RAD50-209ENST00000533482 PAX7P23759 505 aa12.63□□□□□ -0.39
RAD50-209ENST00000533482 ARHGAP8P85298 464 aa12.63□□□□□ -0.39
RAD50-209ENST00000533482 PTP4A2Q12974 167 aa12.63□□□□□ -0.39
RAD50-209ENST00000533482 CRYMQ14894 314 aa12.63□□□□□ -0.39
RAD50-209ENST00000533482 LRRC23Q53EV4 343 aaPredicted RBP12.63□□□□□ -0.39
RAD50-209ENST00000533482 ADCK2Q7Z695 626 aa12.63□□□□□ -0.39
RAD50-209ENST00000533482 CTU1Q7Z7A3 348 aaKnown RBP12.63□□□□□ -0.39
RAD50-209ENST00000533482 CLNKQ7Z7G1 428 aa12.63□□□□□ -0.39
RAD50-209ENST00000533482 C10orf107Q8IVU9 208 aa12.63□□□□□ -0.39
RAD50-209ENST00000533482 KCTD4Q8WVF5 259 aa12.63□□□□□ -0.39
RAD50-209ENST00000533482 TMEM109Q9BVC6 243 aa12.63□□□□□ -0.39
RAD50-209ENST00000533482 TRHDEQ9UKU6 1024 aa12.63□□□□□ -0.39
RAD50-209ENST00000533482 ATP6AP2A0A1C7CYW4 349 aa12.63□□□□□ -0.39
RAD50-209ENST00000533482 MAGEB16A2A368 324 aa12.63□□□□□ -0.39
RAD50-209ENST00000533482 H0YGN5 161 aa12.63□□□□□ -0.39
RAD50-209ENST00000533482 UBDO15205 165 aa12.63□□□□□ -0.39
RAD50-209ENST00000533482 HOXA2O43364 376 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms