RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 RNF34Q969K3 372 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 NT5C3BQ969T7 300 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 PGAP3Q96FM1 320 aaPredicted RBP11.65□□□□□ -0.54
CLCF1-202ENST00000533438 RPRD1AQ96P16 312 aaPredicted RBP11.65□□□□□ -0.54
CLCF1-202ENST00000533438 NPY6RQ99463 290 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 NEUROG2Q9H2A3 272 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 TM7SF3Q9NS93 570 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 PIGVQ9NUD9 493 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 FBXL12Q9NXK8 326 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 ARHGEF38Q9NXL2 777 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 RRN3Q9NYV6 651 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 PCOLCE2Q9UKZ9 415 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 FZD4Q9ULV1 537 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 NCKAP1Q9Y2A7 1128 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 FNDC3AQ9Y2H6 1198 aaKnown RBP11.65□□□□□ -0.54
CLCF1-202ENST00000533438 CEP83Q9Y592 693 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 HS3ST4Q9Y661 456 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 FASNP49327 2511 aaKnown RBP11.65□□□□□ -0.54
CLCF1-202ENST00000533438 PLXNB3Q9ULL4 1909 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 LOC400499M0QZD8 3231 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 I6L893 689 aaPredicted RBP11.64□□□□□ -0.55
CLCF1-202ENST00000533438 M0QYT0 321 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 CBFA2T2O43439 604 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 PAGE1O75459 146 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 FSBPO95073 299 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 TPM2P07951 284 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 UCHL3P15374 230 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 VAV1P15498 845 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 TFE3P19532 575 aaPredicted RBP11.64□□□□□ -0.55
CLCF1-202ENST00000533438 SCNN1AP37088 669 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 NUMBP49757 651 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 GALCP54803 685 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 OXCT1P55809 520 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 UBASH3AP57075 661 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 NME3Q13232 169 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 RAPGEF1Q13905 1077 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 ZNF423Q2M1K9 1284 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 KIF19Q2TAC6 998 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 FILIP1LQ4L180 1135 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 RNF219Q5W0B1 726 aaPredicted RBP11.64□□□□□ -0.55
CLCF1-202ENST00000533438 RAB44Q7Z6P3 723 aaPredicted RBP11.64□□□□□ -0.55
CLCF1-202ENST00000533438 GLRX5Q86SX6 157 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 ZNF683Q8IZ20 524 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 STK40Q8N2I9 435 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 AADATQ8N5Z0 425 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 TMEM35BQ8NCS4 154 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 BAHD1Q8TBE0 780 aaPredicted RBP11.64□□□□□ -0.55
CLCF1-202ENST00000533438 FAM131CQ96AQ9 280 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 NAP1L5Q96NT1 182 aaPredicted RBP11.64□□□□□ -0.55
CLCF1-202ENST00000533438 SYNCQ9H7C4 482 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 EBF2Q9HAK2 575 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 ANLNQ9NQW6 1124 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 TAB2Q9NYJ8 693 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 KLK13Q9UKR3 277 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 VANGL2Q9ULK5 521 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 ANKRD6Q9Y2G4 727 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 PCDHGB2Q9Y5G2 931 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 OR51B4Q9Y5P0 310 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 SNX11Q9Y5W9 270 aa11.64□□□□□ -0.55
CLCF1-202ENST00000533438 A0A1W2PPC4 97 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 LGALS16A8MUM7 142 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 F8VZ95 297 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 CLDN11O75508 207 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 RNASEH2AO75792 299 aaKnown RBP11.63□□□□□ -0.55
CLCF1-202ENST00000533438 ADCY5O95622 1261 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 ADH1BP00325 375 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 C5AR1P21730 350 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 SLC8A1P32418 973 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 DRD3P35462 400 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 GGCXP38435 758 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 NNMTP40261 264 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 CXCR3P49682 368 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 RACK1P63244 317 aaKnown RBP11.63□□□□□ -0.55
CLCF1-202ENST00000533438 SFSWAPQ12872 951 aaKnown RBP11.63□□□□□ -0.55
CLCF1-202ENST00000533438 ELAVL3Q14576 367 aaKnown RBP11.63□□□□□ -0.55
CLCF1-202ENST00000533438 NR1I3Q14994 352 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 TEAD4Q15561 434 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 KCNT1Q5JUK3 1230 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 BRMS1LQ5PSV4 323 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 ARTNQ5T4W7 220 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 NCEH1Q6PIU2 408 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 LAYNQ6UX15 382 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 BNIPLQ7Z465 357 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 C14orf80Q86SX3 495 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 NOP9Q86U38 636 aaKnown RBP11.63□□□□□ -0.55
CLCF1-202ENST00000533438 XYLT1Q86Y38 959 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 CHCHD4Q8N4Q1 142 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 OR2T34Q8NGX1 318 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 EPS8L1Q8TE68 723 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 GANCQ8TET4 914 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 C18orf8Q96DM3 657 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 SPAG5Q96R06 1193 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 OMDQ99983 421 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 FEM1AQ9BSK4 669 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 STK33Q9BYT3 514 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 TRIM5Q9C035 493 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 GANQ9H2C0 597 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 WDCPQ9H6R7 721 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
CLCF1-202ENST00000533438 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms