RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 TTC39BQ5VTQ0 682 aaPredicted RBP23.53■■□□□ 1.36
PKP3-210ENST00000533249 CXorf57Q6NSI4 855 aaKnown RBP23.53■■□□□ 1.36
PKP3-210ENST00000533249 FBXL22Q6P050 247 aa23.53■■□□□ 1.36
PKP3-210ENST00000533249 PDZD3Q86UT5 571 aa23.53■■□□□ 1.36
PKP3-210ENST00000533249 WDTC1Q8N5D0 677 aa23.53■■□□□ 1.36
PKP3-210ENST00000533249 FRS2Q8WU20 508 aa23.53■■□□□ 1.36
PKP3-210ENST00000533249 PPP1R13BQ96KQ4 1090 aa23.53■■□□□ 1.36
PKP3-210ENST00000533249 SLC2A13Q96QE2 648 aa23.53■■□□□ 1.36
PKP3-210ENST00000533249 SPAG5Q96R06 1193 aa23.53■■□□□ 1.36
PKP3-210ENST00000533249 NBEAQ8NFP9 2946 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 C10orf142B7Z368 130 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 ENC1O14682 589 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 RTN2O75298 545 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 LDOC1O95751 146 aaPredicted RBP23.52■■□□□ 1.36
PKP3-210ENST00000533249 GGCXP38435 758 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 IRAK1P51617 712 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 PLK1P53350 603 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 OXCT1P55809 520 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 SLC45A4Q5BKX6 768 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 EFHC1Q5JVL4 640 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 SAP25Q8TEE9 199 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 OR8D1Q8WZ84 308 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 CNDP2Q96KP4 475 aaKnown RBP23.52■■□□□ 1.36
PKP3-210ENST00000533249 FAM81BQ96LP2 452 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 DKK4Q9UBT3 224 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 SLC25A13Q9UJS0 675 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 VANGL2Q9ULK5 521 aa23.52■■□□□ 1.36
PKP3-210ENST00000533249 COL5A1P20908 1838 aaPredicted RBP23.52■■□□□ 1.36
PKP3-210ENST00000533249 TLR4O00206 839 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 HSF2BPO75031 334 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 GLI1P08151 1106 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 MAT2AP31153 395 aaKnown RBP23.51■■□□□ 1.35
PKP3-210ENST00000533249 ARRB1P49407 418 aaPredicted RBP23.51■■□□□ 1.35
PKP3-210ENST00000533249 CLDN6P56747 220 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 NXPH1P58417 271 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 DNAJC3Q13217 504 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 NME3Q13232 169 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 AUHQ13825 339 aaKnown RBP23.51■■□□□ 1.35
PKP3-210ENST00000533249 POM121L1PQ3SYA9 428 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 OR6B2Q6IFH4 312 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 NAPEPLDQ6IQ20 393 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 GBP6Q6ZN66 633 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 FAM183BPQ6ZVS7 135 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 DSG4Q86SJ6 1040 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 EID2Q8N6I1 236 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 PDCD7Q8N8D1 485 aaKnown RBP23.51■■□□□ 1.35
PKP3-210ENST00000533249 OR52K2Q8NGK3 314 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 ASNSD1Q9NWL6 643 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 APEX2Q9UBZ4 518 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 SARDHQ9UL12 918 aa23.51■■□□□ 1.35
PKP3-210ENST00000533249 TPX2Q9ULW0 747 aaKnown RBP23.51■■□□□ 1.35
PKP3-210ENST00000533249 URB1O60287 2271 aaKnown RBP23.5■■□□□ 1.35
PKP3-210ENST00000533249 YKT6O15498 198 aa23.5■■□□□ 1.35
PKP3-210ENST00000533249 LATO43561 262 aa23.5■■□□□ 1.35
PKP3-210ENST00000533249 EPHA8P29322 1005 aaPredicted RBP23.5■■□□□ 1.35
PKP3-210ENST00000533249 PRPF39Q86UA1 669 aaKnown RBP23.5■■□□□ 1.35
PKP3-210ENST00000533249 C1orf131Q8NDD1 294 aaKnown RBP23.5■■□□□ 1.35
PKP3-210ENST00000533249 SHC3Q92529 594 aa23.5■■□□□ 1.35
PKP3-210ENST00000533249 ALG14Q96F25 216 aa23.5■■□□□ 1.35
PKP3-210ENST00000533249 VPS28Q9UK41 221 aa23.5■■□□□ 1.35
PKP3-210ENST00000533249 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.49■■□□□ 1.35
PKP3-210ENST00000533249 BNIP3LO60238 219 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 MBD3O95983 291 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 BNIP3Q12983 259 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 ZNF177Q13360 481 aaPredicted RBP23.49■■□□□ 1.35
PKP3-210ENST00000533249 DLG2Q15700 870 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 EXOC3L4Q17RC7 722 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 FAM46CQ5VWP2 391 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 C11orf57Q6ZUT1 292 aaPredicted RBP23.49■■□□□ 1.35
PKP3-210ENST00000533249 Q6ZVU0 165 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 TMPRSS12Q86WS5 348 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 NOX5Q96PH1 765 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 PPP1R9BQ96SB3 815 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 FEM1AQ9BSK4 669 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 SIK2Q9H0K1 926 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 RWDD2AQ9UIY3 292 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 PCDHGC3Q9UN70 934 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 PCDHGA1Q9Y5H4 931 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 HS3ST4Q9Y661 456 aa23.49■■□□□ 1.35
PKP3-210ENST00000533249 LAMA5O15230 3695 aa23.48■■□□□ 1.35
PKP3-210ENST00000533249 PLRG1O43660 514 aaKnown RBP23.48■■□□□ 1.35
PKP3-210ENST00000533249 ATP9BO43861 1147 aa23.48■■□□□ 1.35
PKP3-210ENST00000533249 RFPL3O75679 317 aa23.48■■□□□ 1.35
PKP3-210ENST00000533249 ERBB2P04626 1255 aa23.48■■□□□ 1.35
PKP3-210ENST00000533249 ZNF18P17022 549 aa23.48■■□□□ 1.35
PKP3-210ENST00000533249 CNTN1Q12860 1018 aa23.48■■□□□ 1.35
PKP3-210ENST00000533249 OLFML1Q6UWY5 402 aa23.48■■□□□ 1.35
PKP3-210ENST00000533249 C14orf80Q86SX3 495 aa23.48■■□□□ 1.35
PKP3-210ENST00000533249 SPATS2Q86XZ4 545 aaKnown RBP23.48■■□□□ 1.35
PKP3-210ENST00000533249 PIP4K2CQ8TBX8 421 aa23.48■■□□□ 1.35
PKP3-210ENST00000533249 FAM131CQ96AQ9 280 aa23.48■■□□□ 1.35
PKP3-210ENST00000533249 LRIG1Q96JA1 1093 aa23.48■■□□□ 1.35
PKP3-210ENST00000533249 SYNCQ9H7C4 482 aa23.48■■□□□ 1.35
PKP3-210ENST00000533249 ARHGAP20Q9P2F6 1191 aa23.48■■□□□ 1.35
PKP3-210ENST00000533249 AJAP1Q9UKB5 411 aaPredicted RBP23.48■■□□□ 1.35
PKP3-210ENST00000533249 DOCK9Q9BZ29 2069 aa23.47■■□□□ 1.35
PKP3-210ENST00000533249 C1QTNF3-AMACRE9PGA6 284 aa23.47■■□□□ 1.35
PKP3-210ENST00000533249 M0QYT0 321 aa23.47■■□□□ 1.35
PKP3-210ENST00000533249 SLC7A4O43246 635 aa23.47■■□□□ 1.35
PKP3-210ENST00000533249 PAGE1O75459 146 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 299 ms