RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 RPRD1AQ96P16 312 aaPredicted RBP18.97■□□□□ 0.63
SMPD1-208ENST00000533123 GOLGA8KD6RF30 607 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 F5H5T6 163 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 H3BQ06 376 aaPredicted RBP18.97■□□□□ 0.63
SMPD1-208ENST00000533123 DCLK1O15075 740 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 KCNN4O15554 427 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 GAD2Q05329 585 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 ZSCAN26Q16670 478 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 ANKRD22Q5VYY1 191 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 BBS7Q8IWZ6 715 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 CFAP52Q8N1V2 620 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 ZCCHC9Q8N567 271 aaKnown RBP18.97■□□□□ 0.63
SMPD1-208ENST00000533123 PPM1EQ8WY54 764 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 CENPHQ9H3R5 247 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 GOLGA6CA6NDK9 693 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 GOLGA8MH3BSY2 632 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 MFSD11O43934 449 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 TSPAN3O60637 253 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 CNTN5O94779 1100 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 ACSL3O95573 720 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 GOLGA6DP0CG33 693 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 ALFQ53S48 1182 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 FAM78AQ5JUQ0 283 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 CIR1Q86X95 450 aaPredicted RBP18.96■□□□□ 0.63
SMPD1-208ENST00000533123 DEFB123Q8N688 67 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 SMRP1Q8NCR6 262 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 PRCCQ92733 491 aaPredicted RBP18.96■□□□□ 0.63
SMPD1-208ENST00000533123 RIPOR3Q96MK2 946 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 GUCD1Q96NT3 240 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 GOLGA6AQ9NYA3 693 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 DTLQ9NZJ0 730 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 STOML2Q9UJZ1 356 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 FARP1Q9Y4F1 1045 aaPredicted RBP18.96■□□□□ 0.63
SMPD1-208ENST00000533123 NUP205Q92621 2012 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 DOCK8Q8NF50 2099 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 IGLV3-10A0A075B6K4 115 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 NUDT17P0C025 328 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 ZFXP17010 805 aaPredicted RBP18.96■□□□□ 0.63
SMPD1-208ENST00000533123 HOXC13P31276 330 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 VIPR2P41587 438 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 MORF4L2Q15014 288 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 HABP4Q5JVS0 413 aaKnown RBP18.96■□□□□ 0.63
SMPD1-208ENST00000533123 ACBD5Q5T8D3 534 aaPredicted RBP18.96■□□□□ 0.63
SMPD1-208ENST00000533123 CPT1BQ92523 772 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 ASB16Q96NS5 453 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 ZYG11BQ9C0D3 744 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 NDFIP2Q9NV92 336 aa18.96■□□□□ 0.63
SMPD1-208ENST00000533123 DOCK4Q8N1I0 1966 aa18.95■□□□□ 0.62
SMPD1-208ENST00000533123 STIP1P31948 543 aaKnown RBP18.95■□□□□ 0.62
SMPD1-208ENST00000533123 SGSHP51688 502 aa18.95■□□□□ 0.62
SMPD1-208ENST00000533123 RPS24P62847 133 aaKnown RBP18.95■□□□□ 0.62
SMPD1-208ENST00000533123 IFFO1Q0D2I5 559 aa18.95■□□□□ 0.62
SMPD1-208ENST00000533123 SKIV2LQ15477 1246 aaKnown RBP18.95■□□□□ 0.62
SMPD1-208ENST00000533123 TFAP2DQ7Z6R9 452 aa18.95■□□□□ 0.62
SMPD1-208ENST00000533123 NPWQ8N729 165 aa18.95■□□□□ 0.62
SMPD1-208ENST00000533123 PRICKLE1Q96MT3 831 aaPredicted RBP18.95■□□□□ 0.62
SMPD1-208ENST00000533123 LRRC3BQ96PB8 259 aa18.95■□□□□ 0.62
SMPD1-208ENST00000533123 RBM15Q96T37 977 aaKnown RBP eCLIP18.95■□□□□ 0.62
SMPD1-208ENST00000533123 TSPYL1Q9H0U9 437 aa18.95■□□□□ 0.62
SMPD1-208ENST00000533123 POMKQ9H5K3 350 aa18.95■□□□□ 0.62
SMPD1-208ENST00000533123 CATSPERBQ9H7T0 1116 aa18.95■□□□□ 0.62
SMPD1-208ENST00000533123 TMBIM4Q9HC24 238 aa18.95■□□□□ 0.62
SMPD1-208ENST00000533123 GDE1Q9NZC3 331 aa18.95■□□□□ 0.62
SMPD1-208ENST00000533123 PPARGC1AQ9UBK2 798 aaKnown RBP18.95■□□□□ 0.62
SMPD1-208ENST00000533123 ZFP37Q9Y6Q3 630 aaPredicted RBP18.95■□□□□ 0.62
SMPD1-208ENST00000533123 TCRBV7S3A2A0A539 114 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 E2F8A0AVK6 867 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 DRGXA6NNA5 263 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 LATS1O95835 1130 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 HTR7P34969 479 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 ZNF77Q15935 545 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 KYNUQ16719 465 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 HP1BP3Q5SSJ5 553 aaPredicted RBP18.94■□□□□ 0.62
SMPD1-208ENST00000533123 SYCP2LQ5T4T6 812 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 GPR153Q6NV75 609 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 TRMT10CQ7L0Y3 403 aaKnown RBP18.94■□□□□ 0.62
SMPD1-208ENST00000533123 TP53INP2Q8IXH6 220 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 RSPRY1Q96DX4 576 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 MYADMQ96S97 322 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 CDH7Q9ULB5 785 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 SHOC2Q9UQ13 582 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 BCLAF3A2AJT9 711 aaKnown RBP18.94■□□□□ 0.62
SMPD1-208ENST00000533123 FGF10O15520 208 aaPredicted RBP18.94■□□□□ 0.62
SMPD1-208ENST00000533123 MYZAPP0CAP1 466 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 FOSL2P15408 326 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 NR2C2P49116 596 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 BASP1P80723 227 aaKnown RBP18.94■□□□□ 0.62
SMPD1-208ENST00000533123 CELF5Q8N6W0 485 aaKnown RBP18.94■□□□□ 0.62
SMPD1-208ENST00000533123 SMARCD2Q92925 531 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 C9orf72Q96LT7 481 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 OLFM3Q96PB7 478 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 DDX50Q9BQ39 737 aaKnown RBP18.94■□□□□ 0.62
SMPD1-208ENST00000533123 NINJ2Q9NZG7 142 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 ZNF510Q9Y2H8 683 aa18.94■□□□□ 0.62
SMPD1-208ENST00000533123 GOLGA6L10A6NI86 522 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 TMEM63AO94886 807 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 KCNA5P22460 613 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 MTHFRP42898 656 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 LMAN1P49257 510 aa18.93■□□□□ 0.62
SMPD1-208ENST00000533123 FASTKD3Q14CZ7 662 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms