RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 FAM129BQ96TA1 746 aa31.12■■■□□ 2.57
SSSCA1-207ENST00000533115 FSCN3Q9NQT6 498 aa31.12■■■□□ 2.57
SSSCA1-207ENST00000533115 MPP6Q9NZW5 540 aa31.12■■■□□ 2.57
SSSCA1-207ENST00000533115 NCKAP1Q9Y2A7 1128 aa31.12■■■□□ 2.57
SSSCA1-207ENST00000533115 SIGLEC16A6NMB1 481 aa31.11■■■□□ 2.57
SSSCA1-207ENST00000533115 TPM4P67936 248 aa31.11■■■□□ 2.57
SSSCA1-207ENST00000533115 NR1I3Q14994 352 aa31.11■■■□□ 2.57
SSSCA1-207ENST00000533115 CST6Q15828 149 aa31.11■■■□□ 2.57
SSSCA1-207ENST00000533115 ARL13BQ3SXY8 428 aa31.11■■■□□ 2.57
SSSCA1-207ENST00000533115 ACAD10Q6JQN1 1059 aa31.11■■■□□ 2.57
SSSCA1-207ENST00000533115 USP30Q70CQ3 517 aa31.11■■■□□ 2.57
SSSCA1-207ENST00000533115 LUZP1Q86V48 1076 aa31.11■■■□□ 2.57
SSSCA1-207ENST00000533115 MMAAQ8IVH4 418 aaKnown RBP31.11■■■□□ 2.57
SSSCA1-207ENST00000533115 FRS2Q8WU20 508 aa31.11■■■□□ 2.57
SSSCA1-207ENST00000533115 CENPIQ92674 756 aaPredicted RBP31.11■■■□□ 2.57
SSSCA1-207ENST00000533115 SYT11Q9BT88 431 aa31.11■■■□□ 2.57
SSSCA1-207ENST00000533115 C6orf106Q9H6K1 298 aaPredicted RBP31.11■■■□□ 2.57
SSSCA1-207ENST00000533115 SGK2Q9HBY8 427 aa31.11■■■□□ 2.57
SSSCA1-207ENST00000533115 SEMA4FO95754 770 aa31.1■■■□□ 2.57
SSSCA1-207ENST00000533115 TNFAIP3P21580 790 aa31.1■■■□□ 2.57
SSSCA1-207ENST00000533115 ADRA1BP35368 520 aa31.1■■■□□ 2.57
SSSCA1-207ENST00000533115 MAPK8P45983 427 aa31.1■■■□□ 2.57
SSSCA1-207ENST00000533115 SFSWAPQ12872 951 aaKnown RBP31.1■■■□□ 2.57
SSSCA1-207ENST00000533115 WDR59Q6PJI9 974 aa31.1■■■□□ 2.57
SSSCA1-207ENST00000533115 TFAP2DQ7Z6R9 452 aa31.1■■■□□ 2.57
SSSCA1-207ENST00000533115 STK40Q8N2I9 435 aa31.1■■■□□ 2.57
SSSCA1-207ENST00000533115 GANCQ8TET4 914 aa31.1■■■□□ 2.57
SSSCA1-207ENST00000533115 FAM172AQ8WUF8 416 aa31.1■■■□□ 2.57
SSSCA1-207ENST00000533115 NCOR2Q9Y618 2525 aa31.1■■■□□ 2.57
SSSCA1-207ENST00000533115 CNOT1A5YKK6 2376 aaKnown RBP31.1■■■□□ 2.57
SSSCA1-207ENST00000533115 NUMA1Q14980 2115 aa31.1■■■□□ 2.57
SSSCA1-207ENST00000533115 TCRBV5S1A1TA0A578 114 aa31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 MID1O15344 667 aa31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 ATP9BO43861 1147 aa31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 VAV1P15498 845 aa31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 GPD1P21695 349 aa31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 KRT83P78385 493 aa31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 ELAVL3Q14576 367 aaKnown RBP31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 ASIC2Q16515 512 aa31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 C6orf118Q5T5N4 469 aa31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 DNAJC24Q6P3W2 148 aa31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 LRSAM1Q6UWE0 723 aa31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 MCOLN2Q8IZK6 566 aa31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 ZYG11BQ9C0D3 744 aa31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 MIR1-1HGQ9H1L0 117 aa31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 FBXL12Q9NXK8 326 aa31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 PPARGC1AQ9UBK2 798 aaKnown RBP31.09■■■□□ 2.57
SSSCA1-207ENST00000533115 ARHGAP33O14559 1287 aa31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 OR1E1P30953 314 aa31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 SLC8A1P32418 973 aa31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 ATXN3P54252 364 aaPredicted RBP31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 HDAC4P56524 1084 aa31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 UAP1L1Q3KQV9 507 aa31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 ACCSLQ4AC99 568 aa31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 PSMB7Q99436 277 aa31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 C2orf49Q9BVC5 232 aaPredicted RBP31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 GTPBP2Q9BX10 602 aaKnown RBP31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 TTYH3Q9C0H2 523 aa31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 AIPL1Q9NZN9 384 aa31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 OR12D3Q9UGF7 316 aa31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 EIF2B4Q9UI10 523 aaKnown RBP31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 DOCK4Q8N1I0 1966 aa31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 PCDH15Q96QU1 1955 aa31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 NYNRINQ9P2P1 1898 aaKnown RBP31.08■■■□□ 2.57
SSSCA1-207ENST00000533115 ADAMTS9Q9P2N4 1935 aa31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 A0A1B0GTW7 788 aa31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 SYPP08247 313 aa31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 KCNA4P22459 653 aa31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 PSMD8P48556 350 aa31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 FANCCQ00597 558 aa31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 NRG1Q02297 640 aaPredicted RBP31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 SFMBT2Q5VUG0 894 aa31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 PPP1R2P3Q6NXS1 205 aa31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 ZCCHC9Q8N567 271 aaKnown RBP31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 SH2D3CQ8N5H7 860 aa31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 EDEM3Q9BZQ6 932 aa31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 OSBPL2Q9H1P3 480 aa31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 HAUS4Q9H6D7 363 aa31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 TAS2R14Q9NYV8 317 aa31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 ZNF212Q9UDV6 495 aa31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 SERGEFQ9UGK8 458 aa31.07■■■□□ 2.56
SSSCA1-207ENST00000533115 A0A0D9SEW6 157 aa31.06■■■□□ 2.56
SSSCA1-207ENST00000533115 A0A1W2PP55 124 aa31.06■■■□□ 2.56
SSSCA1-207ENST00000533115 ANKRD62A6NC57 917 aa31.06■■■□□ 2.56
SSSCA1-207ENST00000533115 ADH1BP00325 375 aa31.06■■■□□ 2.56
SSSCA1-207ENST00000533115 DLG2Q15700 870 aa31.06■■■□□ 2.56
SSSCA1-207ENST00000533115 PPP1R15BQ5SWA1 713 aa31.06■■■□□ 2.56
SSSCA1-207ENST00000533115 SNX19Q92543 992 aa31.06■■■□□ 2.56
SSSCA1-207ENST00000533115 MCEEQ96PE7 176 aa31.06■■■□□ 2.56
SSSCA1-207ENST00000533115 OMDQ99983 421 aa31.06■■■□□ 2.56
SSSCA1-207ENST00000533115 VPS51Q9UID3 782 aa31.06■■■□□ 2.56
SSSCA1-207ENST00000533115 HS3ST2Q9Y278 367 aa31.06■■■□□ 2.56
SSSCA1-207ENST00000533115 ZBTB32Q9Y2Y4 487 aaPredicted RBP31.06■■■□□ 2.56
SSSCA1-207ENST00000533115 ILVBLA1L0T0 632 aa31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 SNAP91O60641 907 aa31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 RNASEH2AO75792 299 aaKnown RBP31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 IL1BP01584 269 aa31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 C5AR1P21730 350 aa31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 RRM1P23921 792 aa31.05■■■□□ 2.56
SSSCA1-207ENST00000533115 ZNF143P52747 638 aaPredicted RBP31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms