RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 SPATA13Q96N96 652 aa16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 PRMT1Q99873 361 aaKnown RBP16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 EPS15L1Q9UBC2 864 aa16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 PCDHGC5Q9Y5F6 944 aa16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 ZFP37Q9Y6Q3 630 aaPredicted RBP16.02■□□□□ 0.15
PPFIA1-222ENST00000532504 ERI2A8K979 691 aaKnown RBP16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 E9PAM4 449 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 GRM6O15303 877 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 GUCA1CO95843 209 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 HSD17B3P37058 310 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 BTKQ06187 659 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 HIST2H2ACQ16777 129 aaPredicted RBP16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 PARP6Q2NL67 630 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 SPDYE7PQ495Y7 208 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 HIST2H2AA3Q6FI13 130 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 SLC26A9Q7LBE3 791 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 KCNMB4Q86W47 210 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 EPS8L3Q8TE67 593 aaKnown RBP16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 NKX2-4Q9H2Z4 354 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 ERVK-5Q9HDB9 667 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 C1orf232A0A0U1RR37 186 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 GUCY1A3Q02108 690 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 MGAT5Q09328 741 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 GALNT3Q14435 633 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 CLEC20AQ6ZU45 233 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 IRGQQ8WZA9 623 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 ZIM3Q96PE6 472 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 SRPK1Q96SB4 655 aaKnown RBP16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 ARHGEF4Q9NR80 690 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 DNAJC16Q9Y2G8 782 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 CRYL1Q9Y2S2 319 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 DNALI1O14645 258 aaPredicted RBP16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 TIMP1P01033 207 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 INSCQ1MX18 579 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 RSRC1Q96IZ7 334 aaKnown RBP16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 VCX3BQ9H321 246 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 ETNK1Q9HBU6 452 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 MEI4A8MW99 385 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 C9IYK1 514 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 GPR1P46091 355 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 C6orf10Q5SRN2 563 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 ETNK2Q9NVF9 386 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 PCDHGC3Q9UN70 934 aa16.01■□□□□ 0.15
PPFIA1-222ENST00000532504 MTA2O94776 668 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 FMO4P31512 558 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 PYROXD2Q8N2H3 581 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 LRRC15Q8TF66 581 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 ZMAT2Q96NC0 199 aaKnown RBP16■□□□□ 0.15
PPFIA1-222ENST00000532504 PAFAH2Q99487 392 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 FAM96AQ9H5X1 160 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 CAPN10Q9HC96 672 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 HECAQ9UBI9 543 aaPredicted RBP16■□□□□ 0.15
PPFIA1-222ENST00000532504 GJD2Q9UKL4 321 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 MYH1P12882 1939 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 TCP11X1B4DZS4 312 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 PITPNM1O00562 1244 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 MEFVO15553 781 aaPredicted RBP16■□□□□ 0.15
PPFIA1-222ENST00000532504 SOD2P04179 222 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 GDI1P31150 447 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 ABCG1P45844 678 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 LVRNQ6Q4G3 990 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 C12orf76Q8N812 135 aaPredicted RBP16■□□□□ 0.15
PPFIA1-222ENST00000532504 TNKS2Q9H2K2 1166 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 NCANO14594 1321 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 MAGEB16A2A368 324 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 INPPL1O15357 1258 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 H2AFYO75367 372 aaKnown RBP16■□□□□ 0.15
PPFIA1-222ENST00000532504 UGT2B4P06133 528 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 SSTR1P30872 391 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 RPL21P46778 160 aaKnown RBP16■□□□□ 0.15
PPFIA1-222ENST00000532504 NPY2RP49146 381 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 OSTM1Q86WC4 334 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 PSTKQ8IV42 348 aaKnown RBP16■□□□□ 0.15
PPFIA1-222ENST00000532504 OR7D4Q8NG98 312 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 RPL10LQ96L21 214 aaKnown RBP16■□□□□ 0.15
PPFIA1-222ENST00000532504 FAM111AQ96PZ2 611 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 PABPC3Q9H361 631 aaKnown RBP16■□□□□ 0.15
PPFIA1-222ENST00000532504 ASB8Q9H765 288 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 HSFX4A0A1B0GTS1 333 aaPredicted RBP16■□□□□ 0.15
PPFIA1-222ENST00000532504 HSFX3A0A1B0GWH4 333 aaPredicted RBP16■□□□□ 0.15
PPFIA1-222ENST00000532504 MEIS3P2A8K0S8 358 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 MGEA5O60502 916 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 HSPA8P11142 646 aaKnown RBP16■□□□□ 0.15
PPFIA1-222ENST00000532504 MAPK8P45983 427 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 ATXN1P54253 815 aaKnown RBP16■□□□□ 0.15
PPFIA1-222ENST00000532504 TAS1R3Q7RTX0 852 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 SYTL1Q8IYJ3 562 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 CCDC185Q8N715 623 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 PKNOX2Q96KN3 472 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 PRKD2Q9BZL6 878 aa16■□□□□ 0.15
PPFIA1-222ENST00000532504 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16■□□□□ 0.15
PPFIA1-222ENST00000532504 TMEM120BA0PK00 339 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 CHN1P15882 459 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 CD151P48509 253 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 PSMD8P48556 350 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 RAP1GDS1P52306 607 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 XRCC4Q13426 336 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 ZFP69BQ9UJL9 534 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 hCG_1818297A0A087WSY0 165 aa15.99■□□□□ 0.15
PPFIA1-222ENST00000532504 RNASEH2AO75792 299 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms