RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 RPRD1AQ96P16 312 aaPredicted RBP13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 SPAG5Q96R06 1193 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 FEM1AQ9BSK4 669 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 GDF3Q9NR23 364 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 APEX2Q9UBZ4 518 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 PCDHGC3Q9UN70 934 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 NBEAQ8NFP9 2946 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 TBC1D3DA0A087WVF3 549 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 TBC1D3IA0A087WXS9 549 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 TBC1D3EA0A087X179 549 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 TBC1D3KA0A087X1G2 549 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 TBC1D3FA6NER0 549 aaPredicted RBP13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 TBC1D3LB9A6J9 549 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 TLR4O00206 839 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 PLK4O00444 970 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 YKT6O15498 198 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 ATP9BO43861 1147 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 TBC1D3HP0C7X1 549 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 IRAK1P51617 712 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 METAP1P53582 386 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 NXPH1P58417 271 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 PPP2CBP62714 309 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 PPP2CAP67775 309 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 CENPCQ03188 943 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 CYP4F3Q08477 520 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 NME3Q13232 169 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 MTA1Q13330 715 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 AUHQ13825 339 aaKnown RBP13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 EXOC3L4Q17RC7 722 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 COL28A1Q2UY09 1125 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 SLC45A4Q5BKX6 768 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 TBC1D3GQ6DHY5 549 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 OR6B2Q6IFH4 312 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 TBC1D3CQ6IPX1 549 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 C11orf57Q6ZUT1 292 aaPredicted RBP13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 FAM183BPQ6ZVS7 135 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 DSG4Q86SJ6 1040 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 IRF2BP1Q8IU81 584 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 CREBRFQ8IUR6 639 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 TBC1D3Q8IZP1 549 aaPredicted RBP13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 OR52K2Q8NGK3 314 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 OR8D1Q8WZ84 308 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 FAM131CQ96AQ9 280 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 PPP1R9BQ96SB3 815 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 SARDHQ9UL12 918 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 OR51B4Q9Y5P0 310 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 CACNA1GO43497 2377 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 ATRXP46100 2492 aa13.18□□□□□ -0.3
TM9SF1-211ENST00000531406 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 SYCE3A1L190 88 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 GTPBP10A4D1E9 387 aaKnown RBP13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 CBX4O00257 560 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 ENC1O14682 589 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 SLC7A4O43246 635 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 RTN2O75298 545 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 PAGE1O75459 146 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 LDOC1O95751 146 aaPredicted RBP13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 ERBB2P04626 1255 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 PON1P27169 355 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 ARRB1P49407 418 aaPredicted RBP13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 PTK2Q05397 1052 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 ZNF177Q13360 481 aaPredicted RBP13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 NUMA1Q14980 2115 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 DLG2Q15700 870 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 ACCSLQ4AC99 568 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 FAM46CQ5VWP2 391 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 SMYD5Q6GMV2 418 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 NAPEPLDQ6IQ20 393 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 SASS6Q6UVJ0 657 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 OLFML1Q6UWY5 402 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 RBM43Q6ZSC3 357 aaKnown RBP13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 SLC26A9Q7LBE3 791 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 C14orf80Q86SX3 495 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 PRPF39Q86UA1 669 aaKnown RBP13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 PDZD3Q86UT5 571 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 TMPRSS12Q86WS5 348 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 EID2Q8N6I1 236 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 PDCD7Q8N8D1 485 aaKnown RBP13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 MFSD2AQ8NA29 543 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 C1orf131Q8NDD1 294 aaKnown RBP13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 CNDP2Q96KP4 475 aaKnown RBP13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 NOX5Q96PH1 765 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 KDM4CQ9H3R0 1056 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 ERVMER34-1Q9H9K5 563 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 KIAA1468Q9P260 1216 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 ARHGAP20Q9P2F6 1191 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 SLC25A13Q9UJS0 675 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 VPS28Q9UK41 221 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 AJAP1Q9UKB5 411 aaPredicted RBP13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 VANGL2Q9ULK5 521 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 PPM1HQ9ULR3 514 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 PCDHGA1Q9Y5H4 931 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 HS3ST4Q9Y661 456 aa13.17□□□□□ -0.3
TM9SF1-211ENST00000531406 M0QYT0 321 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 FOXN3O00409 490 aaPredicted RBP13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 ALOX15BO15296 676 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 PLRG1O43660 514 aaKnown RBP13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 CLDN11O75508 207 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 DAB1O75553 588 aa13.16□□□□□ -0.3
TM9SF1-211ENST00000531406 EPHA8P29322 1005 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms