RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 RNASE12Q5GAN4 147 aaKnown RBP6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 CDC73Q6P1J9 531 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 ZNF585AQ6P3V2 769 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 NCEH1Q6PIU2 408 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 C17orf53Q8N3J3 647 aaPredicted RBP6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 LINC01465Q8N7H1 131 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 NELL1Q92832 810 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 ATP2A3Q93084 1043 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 FMNL2Q96PY5 1086 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 SLC32A1Q9H598 525 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 ZNF703Q9H7S9 590 aaPredicted RBP6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 EHD2Q9NZN4 543 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 PEMTQ9UBM1 199 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 ZNF70Q9UC06 446 aaPredicted RBP6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 CFDP1Q9UEE9 299 aaPredicted RBP6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 SPATA31A1Q5TZJ5 1347 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 PABPN1LA6NDY0 278 aaKnown RBP6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 H0YIZ8 118 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 GCOM1H8Y6P7 765 aaPredicted RBP6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 HBP1O60381 514 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 PDE8BO95263 885 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 EIF2S1P05198 315 aaKnown RBP6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 NR2F1P10589 423 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 RARGP13631 454 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 APEHP13798 732 aaKnown RBP6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 NNMTP40261 264 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 GARSP41250 739 aaKnown RBP6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 OAZ1P54368 228 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 OLR1P78380 273 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 STK4Q13043 487 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 ABHD17BQ5VST6 288 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 TTI2Q6NXR4 508 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 ANKRD16Q6P6B7 361 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 C17orf99Q6UX52 265 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 FRMD1Q8N878 549 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 GPATCH11Q8N954 259 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 IL17DQ8TAD2 202 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 ARHGEF2Q92974 986 aaKnown RBP6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 INTS12Q96CB8 462 aaKnown RBP6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 ZNF845Q96IR2 970 aaPredicted RBP6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 RADILQ96JH8 1075 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 TEPSINQ96N21 525 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 BAG1Q99933 345 aaPredicted RBP6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 ZCCHC4Q9H5U6 513 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 ZCCHC17Q9NP64 241 aaKnown RBP6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 HSPB7Q9UBY9 170 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 FZD1Q9UP38 647 aa6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 MAGED1Q9Y5V3 778 aaPredicted RBP6.86□□□□□ -1.31
CAPRIN1-208ENST00000530008 FAM237BA0A1B0GVD1 139 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 PIPSLA2A3N6 862 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 MYO1GB0I1T2 1018 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 QSOX1O00391 747 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 CEP104O60308 925 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 ERAL1O75616 437 aaKnown RBP6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 CNTN5O94779 1100 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 RPN1P04843 607 aaKnown RBP6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 C1SP09871 688 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 NDUFB7P17568 137 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 CDH2P19022 906 aaPredicted RBP6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 CPOXP36551 454 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 ADPRHP54922 357 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 EEFSECP57772 596 aaKnown RBP6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 LAIR1Q6GTX8 287 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 PRPF39Q86UA1 669 aaKnown RBP6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 SETD9Q8NE22 299 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 CADM4Q8NFZ8 388 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 FYTTD1Q96QD9 318 aaKnown RBP6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 MMS19Q96T76 1030 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 SMARCAD1Q9H4L7 1026 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 TMEM248Q9NWD8 314 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 ASNSD1Q9NWL6 643 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 UPB1Q9UBR1 384 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 ST6GALNAC2Q9UJ37 374 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 CDH22Q9UJ99 828 aa6.85□□□□□ -1.31
CAPRIN1-208ENST00000530008 C17orf113A0A1B0GUU1 675 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 TSPY2A6NKD2 308 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 MCIDASD6RGH6 385 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 PLSCR1O15162 318 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 BCAT2O15382 392 aaPredicted RBP6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 TACC1O75410 805 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 GALTP07902 379 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 ADH4P08319 380 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 CLTBP09497 229 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 TSPY3P0CV98 308 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 TSPY8P0CW00 308 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 TYK2P29597 1187 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 VPS41P49754 854 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 ZNF84P51523 738 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 TSPY1Q01534 308 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 ABHD18Q0P651 414 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 SEMA3AQ14563 771 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 CRYMQ14894 314 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 MFSD13AQ14CX5 517 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 PSMD6Q15008 389 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 RASA2Q15283 850 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 FBXO43Q4G163 708 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 PLEKHS1Q5SXH7 462 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 KAZNQ674X7 775 aa6.84□□□□□ -1.31
CAPRIN1-208ENST00000530008 RPUSD3Q6P087 351 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms