RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 PWWP2AQ96N64 755 aa14.78□□□□□ -0.04
TTC39A-216ENST00000530004 CATSPERBQ9H7T0 1116 aa14.78□□□□□ -0.04
TTC39A-216ENST00000530004 ZFP14Q9HCL3 533 aa14.78□□□□□ -0.04
TTC39A-216ENST00000530004 OBP2AQ9NY56 170 aa14.78□□□□□ -0.04
TTC39A-216ENST00000530004 VANGL2Q9ULK5 521 aa14.78□□□□□ -0.04
TTC39A-216ENST00000530004 FARP1Q9Y4F1 1045 aaPredicted RBP14.78□□□□□ -0.04
TTC39A-216ENST00000530004 KLKB1P03952 638 aa14.77□□□□□ -0.05
TTC39A-216ENST00000530004 HARS2P49590 506 aaKnown RBP14.77□□□□□ -0.05
TTC39A-216ENST00000530004 BASP1P80723 227 aaKnown RBP14.77□□□□□ -0.05
TTC39A-216ENST00000530004 GPS2Q13227 327 aa14.77□□□□□ -0.05
TTC39A-216ENST00000530004 AAK1Q2M2I8 961 aa14.77□□□□□ -0.05
TTC39A-216ENST00000530004 TANGO2Q6ICL3 276 aa14.77□□□□□ -0.05
TTC39A-216ENST00000530004 HTR3DQ70Z44 454 aa14.77□□□□□ -0.05
TTC39A-216ENST00000530004 PPIL6Q8IXY8 311 aa14.77□□□□□ -0.05
TTC39A-216ENST00000530004 ZCCHC9Q8N567 271 aaKnown RBP14.77□□□□□ -0.05
TTC39A-216ENST00000530004 TDRD5Q8NAT2 981 aaKnown RBP14.77□□□□□ -0.05
TTC39A-216ENST00000530004 ST13P5Q8NFI4 369 aaPredicted RBP14.77□□□□□ -0.05
TTC39A-216ENST00000530004 CPT1BQ92523 772 aa14.77□□□□□ -0.05
TTC39A-216ENST00000530004 LRRC3BQ96PB8 259 aa14.77□□□□□ -0.05
TTC39A-216ENST00000530004 ZIM3Q96PE6 472 aa14.77□□□□□ -0.05
TTC39A-216ENST00000530004 TSPYL1Q9H0U9 437 aa14.77□□□□□ -0.05
TTC39A-216ENST00000530004 DNAJC17Q9NVM6 304 aaKnown RBP14.77□□□□□ -0.05
TTC39A-216ENST00000530004 SHOC2Q9UQ13 582 aa14.77□□□□□ -0.05
TTC39A-216ENST00000530004 SH3BP1Q9Y3L3 701 aa14.77□□□□□ -0.05
TTC39A-216ENST00000530004 PRUNE2Q8WUY3 3088 aa14.77□□□□□ -0.05
TTC39A-216ENST00000530004 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.76□□□□□ -0.05
TTC39A-216ENST00000530004 E2F8A0AVK6 867 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 HEPACAM2A8MVW5 462 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 NCAM2O15394 837 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 GCATO75600 419 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 MX2P20592 715 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 CORO1AP31146 461 aaKnown RBP14.76□□□□□ -0.05
TTC39A-216ENST00000530004 AUHQ13825 339 aaKnown RBP14.76□□□□□ -0.05
TTC39A-216ENST00000530004 SPDYCQ5MJ68 293 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 ANKRD22Q5VYY1 191 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 RAP1GAP2Q684P5 730 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 PARM1Q6UWI2 310 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 Q6ZNB5 142 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 DENND1CQ8IV53 801 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 ZNF683Q8IZ20 524 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 IQCKQ8N0W5 287 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 NAT8LQ8N9F0 302 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 BPIFB1Q8TDL5 484 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 PRCCQ92733 491 aaPredicted RBP14.76□□□□□ -0.05
TTC39A-216ENST00000530004 FGF14Q92915 247 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 E2F7Q96AV8 911 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 P2RY11Q96G91 374 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 CELF6Q96J87 481 aaKnown RBP14.76□□□□□ -0.05
TTC39A-216ENST00000530004 RUFY1Q96T51 708 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 FERMT1Q9BQL6 677 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 RAB6BQ9NRW1 208 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 OGFRQ9NZT2 677 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 LSM7Q9UK45 103 aaKnown RBP14.76□□□□□ -0.05
TTC39A-216ENST00000530004 DOCK8Q8NF50 2099 aa14.76□□□□□ -0.05
TTC39A-216ENST00000530004 C5orf60A6NFR6 353 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 AGPSO00116 658 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 SCAMP3O14828 347 aaKnown RBP14.75□□□□□ -0.05
TTC39A-216ENST00000530004 GALNT2Q10471 571 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 MTA1Q13330 715 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 LRRC31Q6UY01 552 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 MTSS1LQ765P7 747 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 HOOK3Q86VS8 718 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 KRT222Q8N1A0 295 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 PLCD3Q8N3E9 789 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 AZIN2Q96A70 460 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 ELSPBP1Q96BH3 223 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 FOXP3Q9BZS1 431 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 KLC2Q9H0B6 622 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 PABPC3Q9H361 631 aaKnown RBP14.75□□□□□ -0.05
TTC39A-216ENST00000530004 SEMA4AQ9H3S1 761 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 MPP6Q9NZW5 540 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 SEPT10Q9P0V9 454 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 AGO1Q9UL18 857 aaKnown RBP14.75□□□□□ -0.05
TTC39A-216ENST00000530004 PLAAQ9Y263 795 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 TCRBV7S3A2A0A539 114 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 ANHXE9PGG2 379 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 GOLGA8MH3BSY2 632 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 ECI2O75521 394 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 STK10O94804 968 aaKnown RBP14.75□□□□□ -0.05
TTC39A-216ENST00000530004 GARSP41250 739 aaKnown RBP14.75□□□□□ -0.05
TTC39A-216ENST00000530004 HTR4Q13639 388 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 VITQ6UXI7 678 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 C4orf22Q6V702 233 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 LZTR1Q8N653 840 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 KIAA1958Q8N8K9 716 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 RTL3Q8N8U3 475 aaKnown RBP14.75□□□□□ -0.05
TTC39A-216ENST00000530004 HDAC11Q96DB2 347 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 PRMT1Q99873 361 aaKnown RBP14.75□□□□□ -0.05
TTC39A-216ENST00000530004 ZYG11BQ9C0D3 744 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 BRD8Q9H0E9 1235 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 EPB41L4BQ9H329 900 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 CDC42EP4Q9H3Q1 356 aaKnown RBP14.75□□□□□ -0.05
TTC39A-216ENST00000530004 STOML2Q9UJZ1 356 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 NUMBLQ9Y6R0 609 aa14.75□□□□□ -0.05
TTC39A-216ENST00000530004 A0A0A0MRY4 1105 aa14.74□□□□□ -0.05
TTC39A-216ENST00000530004 RNF103O00237 685 aa14.74□□□□□ -0.05
TTC39A-216ENST00000530004 DFFAO00273 331 aa14.74□□□□□ -0.05
TTC39A-216ENST00000530004 ACSL4O60488 711 aa14.74□□□□□ -0.05
TTC39A-216ENST00000530004 ZNF189O75820 626 aaPredicted RBP14.74□□□□□ -0.05
TTC39A-216ENST00000530004 TMEM63AO94886 807 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms