RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 OPA3Q9H6K4 179 aa3.76□□□□□ -1.81
AMBRA1-208ENST00000529558 TRPV4Q9HBA0 871 aa3.76□□□□□ -1.81
AMBRA1-208ENST00000529558 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.76□□□□□ -1.81
AMBRA1-208ENST00000529558 ARHGEF3Q9NR81 526 aa3.76□□□□□ -1.81
AMBRA1-208ENST00000529558 FAM53CQ9NYF3 392 aa3.76□□□□□ -1.81
AMBRA1-208ENST00000529558 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.76□□□□□ -1.81
AMBRA1-208ENST00000529558 WDR35Q9P2L0 1181 aa3.76□□□□□ -1.81
AMBRA1-208ENST00000529558 MGAT4CQ9UBM8 478 aa3.76□□□□□ -1.81
AMBRA1-208ENST00000529558 MKLN1Q9UL63 735 aa3.76□□□□□ -1.81
AMBRA1-208ENST00000529558 SESN1Q9Y6P5 492 aa3.76□□□□□ -1.81
AMBRA1-208ENST00000529558 hCG_1809904A0A1W2PP81 198 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 A0A1W2PPE2 198 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 A0A1W2PR64 198 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 OR2A25A4D2G3 310 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 C17orf100A8MU93 164 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 EIF3CLB5ME19 914 aaKnown RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 C19orf81C9J6K1 198 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 CTDSP2O14595 271 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 SLC16A3O15427 465 aaKnown RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 HTATSF1O43719 755 aaKnown RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 TACC1O75410 805 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 SEC31AO94979 1220 aaKnown RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 GGPS1O95749 300 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 RB1P06400 928 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 TUBBP07437 444 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 GALTP07902 379 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 GABRB1P18505 474 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 MATN1P21941 496 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 DUSP1P28562 367 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 FMO4P31512 558 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 CIITAP33076 1130 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 ATP6V1E1P36543 226 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 CLK3P49761 638 aaKnown RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 HNRNPMP52272 730 aaKnown RBP eCLIP3.75□□□□□ -1.811e-7■■□□□ 13.8
AMBRA1-208ENST00000529558 GP2P55259 537 aaKnown RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 PPP2CBP62714 309 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 PPP2CAP67775 309 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 CXADRP78310 365 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 CEBPZQ03701 1054 aaKnown RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 WASHC5Q12768 1159 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 FOXL1Q12952 345 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 CSTF3Q12996 717 aaKnown RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 FRG1Q14331 258 aaKnown RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 IL13RA2Q14627 380 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 SSPNQ14714 243 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 PKN2Q16513 984 aaKnown RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 GEN1Q17RS7 908 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 AP5B1Q2VPB7 878 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 ZNF628Q5EBL2 1059 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 C9orf152Q5JTZ5 239 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 KRT80Q6KB66 452 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 HMBOX1Q6NT76 420 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 SLC2A7Q6PXP3 512 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 CRELD2Q6UXH1 353 aaPredicted RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 SLC39A5Q6ZMH5 540 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 HTR3DQ70Z44 454 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 RTL10Q7L3V2 364 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 PLPPR4Q7Z2D5 763 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 CCDC186Q7Z3E2 898 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 MAVSQ7Z434 540 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 CCDC91Q7Z6B0 441 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 PRRT2Q7Z6L0 340 aaPredicted RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 GALNT7Q86SF2 657 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 TADA2BQ86TJ2 420 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 TAX1BP1Q86VP1 789 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 TMPRSS6Q8IU80 811 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 EPHX4Q8IUS5 362 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 GSPT2Q8IYD1 628 aaKnown RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 PNPLA1Q8N8W4 532 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 NAT8LQ8N9F0 302 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 SRFBP1Q8NEF9 429 aaKnown RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 MAFAQ8NHW3 353 aaPredicted RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 GDAP1Q8TB36 358 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 MGARPQ8TDB4 240 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 DEPDC1BQ8WUY9 529 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 R3HDM4Q96D70 268 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 SAT2Q96F10 170 aaPredicted RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 CCDC34Q96HJ3 373 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 BOD1Q96IK1 185 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 LRRC37BQ96QE4 947 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 FNBP1Q96RU3 617 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 MNTQ99583 582 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 TUBB6Q9BUF5 446 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 HEMGNQ9BXL5 484 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 TEX101Q9BY14 249 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 ANKRD2Q9GZV1 360 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 INTS13Q9NVM9 706 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 NCKIPSDQ9NZQ3 722 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 CPSF2Q9P2I0 782 aaKnown RBP3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 VPS4AQ9UN37 437 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 MTMR6Q9Y217 621 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 KNSTRNQ9Y448 316 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 CHST2Q9Y4C5 530 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 TRPV2Q9Y5S1 764 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 ABCC9O60706 1549 aa3.75□□□□□ -1.81
AMBRA1-208ENST00000529558 AOX1Q06278 1338 aa3.74□□□□□ -1.81
AMBRA1-208ENST00000529558 A0A1W2PRG0 241 aa3.74□□□□□ -1.81
AMBRA1-208ENST00000529558 LRRC53A6NM62 1247 aa3.74□□□□□ -1.81
AMBRA1-208ENST00000529558 GRXCR1A8MXD5 290 aa3.74□□□□□ -1.81
AMBRA1-208ENST00000529558 TAF4O00268 1085 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms