RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 TWISTNBQ3B726 338 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-212ENST00000529046 RNASE12Q5GAN4 147 aaKnown RBP5.41□□□□□ -1.54
CSDE1-212ENST00000529046 GRHL2Q6ISB3 625 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 CLEC9AQ6UXN8 241 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 DPY19L3Q6ZPD9 716 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 NKAPQ8N5F7 415 aaKnown RBP5.41□□□□□ -1.54
CSDE1-212ENST00000529046 TSPYL6Q8N831 410 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 ABHD11Q8NFV4 315 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 LINS1Q8NG48 757 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 STT3BQ8TCJ2 826 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 OVCA2Q8WZ82 227 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 RMDN3Q96TC7 470 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 ANKRD2Q9GZV1 360 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 MYH16Q9H6N6 1097 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 MYOZ2Q9NPC6 264 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 OBP2BQ9NPH6 170 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 FSCN3Q9NQT6 498 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 POLR2AP24928 1970 aaKnown RBP5.41□□□□□ -1.54
CSDE1-212ENST00000529046 WIPF3A6NGB9 483 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 AQP12BA6NM10 295 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 H7C1Q1 480 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 TMPRSS11DO60235 418 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 TCEA3O75764 348 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 EIF3JO75822 258 aaKnown RBP5.4□□□□□ -1.54
CSDE1-212ENST00000529046 PRKCGP05129 697 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 ANXA6P08133 673 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 ENGP17813 658 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 DIO1P49895 249 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 PDE1AP54750 535 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 FKBP1AP62942 108 aaKnown RBP5.4□□□□□ -1.54
CSDE1-212ENST00000529046 SRSF4Q08170 494 aaKnown RBP5.4□□□□□ -1.54
CSDE1-212ENST00000529046 BLMHQ13867 455 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 PKN2Q16513 984 aaKnown RBP5.4□□□□□ -1.54
CSDE1-212ENST00000529046 SUMO4Q6EEV6 95 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 LIN54Q6MZP7 749 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 PIK3AP1Q6ZUJ8 805 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 RASGRP3Q8IV61 690 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 C11orf44Q8N8P7 122 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 PNPLA1Q8N8W4 532 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 VPS37AQ8NEZ2 397 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 EDC3Q96F86 508 aaKnown RBP5.4□□□□□ -1.54
CSDE1-212ENST00000529046 SNX18Q96RF0 628 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 KATNAL1Q9BW62 490 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 AGO4Q9HCK5 861 aaKnown RBP5.4□□□□□ -1.54
CSDE1-212ENST00000529046 KCNK9Q9NPC2 374 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 GGA3Q9NZ52 723 aa5.4□□□□□ -1.54
CSDE1-212ENST00000529046 TAF1P21675 1872 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 H3BNC9 293 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 AP4M1O00189 453 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 ACKR2O00590 384 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 PIP5K1BO14986 540 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 TAF5LO75529 589 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 MBPP02686 304 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-212ENST00000529046 HNRNPCP07910 306 aaKnown RBP eCLIP5.39□□□□□ -1.553e-6■■■□□ 18.5
CSDE1-212ENST00000529046 TMEM225BP0DP42 221 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 APEHP13798 732 aaKnown RBP5.39□□□□□ -1.55
CSDE1-212ENST00000529046 IGHMBP2P38935 993 aaKnown RBP5.39□□□□□ -1.55
CSDE1-212ENST00000529046 PBX1P40424 430 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 TRAPPC10P48553 1259 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 CDK7P50613 346 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 DGKQP52824 942 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 CYP4F2P78329 520 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 DEUP1Q05D60 604 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 LMAN2Q12907 356 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 GRAMD1BQ3KR37 738 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 TMEM63BQ5T3F8 832 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 MSANTD2Q6P1R3 559 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 CEP85Q6P2H3 762 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 BCDIN3DQ7Z5W3 292 aaKnown RBP5.39□□□□□ -1.55
CSDE1-212ENST00000529046 FSTL5Q8N475 847 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-212ENST00000529046 OR1N1Q8NGS0 311 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 STYXQ8WUJ0 223 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 DNAAF4Q8WXU2 420 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 CDCA5Q96FF9 252 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 ZBED3Q96IU2 234 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-212ENST00000529046 DPCDQ9BVM2 203 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-212ENST00000529046 RNF186Q9NXI6 227 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 ASIC5Q9NY37 505 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 SERGEFQ9UGK8 458 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 MAGED2Q9UNF1 606 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-212ENST00000529046 COL4A1P02462 1669 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 AOX1Q06278 1338 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 PSME4Q14997 1843 aa5.39□□□□□ -1.55
CSDE1-212ENST00000529046 COL1A1P02452 1464 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-212ENST00000529046 CGB1A6NKQ9 187 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 LINC01548A6NM66 108 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 QSOX1O00391 747 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 CTIFO43310 598 aaKnown RBP5.38□□□□□ -1.55
CSDE1-212ENST00000529046 TPD52L2O43399 206 aaKnown RBP5.38□□□□□ -1.55
CSDE1-212ENST00000529046 ASNA1O43681 348 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 CREB1P16220 341 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 ATF7P17544 494 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-212ENST00000529046 NF2P35240 595 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 ABCG1P45844 678 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 PNLIPRP1P54315 467 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 GRM1Q13255 1194 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 BEND3Q5T5X7 828 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 TTLL5Q6EMB2 1281 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 KIRREL2Q6UWL6 708 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 SMC5Q8IY18 1101 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms