RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 IGLV3-10A0A075B6K4 115 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 DFFAO00273 331 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 MAFKO60675 156 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 PYGBP11216 843 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 CCL5P13501 91 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 NFKB1P19838 968 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 ALDH3A1P30838 453 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 HADHAP40939 763 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 ETV4P43268 484 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 RENBPP51606 427 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 ACTN3Q08043 901 aaPredicted RBP15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 CCDC15Q0P6D6 951 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 ZBTB17Q13105 803 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 SLC8B1Q6J4K2 584 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 CNKSR3Q6P9H4 555 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 OR52K1Q8NGK4 314 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 PTCD2Q8WV60 388 aaKnown RBP15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 ATP2A3Q93084 1043 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 CELF6Q96J87 481 aaKnown RBP15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 PGLYRP2Q96PD5 576 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 BEGAINQ9BUH8 593 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 MANSC1Q9H8J5 431 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 GLOD4Q9HC38 313 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 PRDM5Q9NQX1 630 aaPredicted RBP15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 ENTPD7Q9NQZ7 604 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 SMYD2Q9NRG4 433 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 TMEM248Q9NWD8 314 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 SYBUQ9NX95 663 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 MARCH2Q9P0N8 246 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 MTRRQ9UBK8 725 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 PLLPQ9Y342 182 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 HBS1LQ9Y450 684 aaKnown RBP15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 RPS6KL1Q9Y6S9 549 aa15.09■□□□□ 0.01
ECHDC1-220ENST00000528402 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.08■□□□□ 0
ECHDC1-220ENST00000528402 DRGXA6NNA5 263 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 MSI1O43347 362 aaKnown RBP15.08■□□□□ 0
ECHDC1-220ENST00000528402 RFPL1O75677 317 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 NEBLO76041 1014 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 TGDSO95455 350 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 EFEMP2O95967 443 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 IGLV3-27P01718 113 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 CSH1P0DML2 217 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 CSH2P0DML3 217 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 CRHR1P34998 444 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 GP5P40197 560 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 GPR15P49685 360 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 ARPP19P56211 112 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 TAF10Q12962 218 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 HNRNPDQ14103 355 aaKnown RBP15.08■□□□□ 0
ECHDC1-220ENST00000528402 INSCQ1MX18 579 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 SNX30Q5VWJ9 437 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 FYB2Q5VWT5 728 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 TRMT10BQ6PF06 316 aaKnown RBP15.08■□□□□ 0
ECHDC1-220ENST00000528402 KYAT3Q6YP21 454 aaKnown RBP15.08■□□□□ 0
ECHDC1-220ENST00000528402 RNF19BQ6ZMZ0 732 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 FBXO22Q8NEZ5 403 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 NSMCE1Q8WV22 266 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 CERS2Q96G23 380 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 GORASP1Q9BQQ3 440 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 MLPHQ9BV36 600 aaPredicted RBP15.08■□□□□ 0
ECHDC1-220ENST00000528402 CEP41Q9BYV8 373 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 ZFATQ9P243 1243 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 DCDC2Q9UHG0 476 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 GRID1Q9ULK0 1009 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 SOX13Q9UN79 622 aa15.08■□□□□ 0
ECHDC1-220ENST00000528402 DOCK4Q8N1I0 1966 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 SLC38A8A6NNN8 435 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 GOLGA8RI6L899 631 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 BIRC5O15392 142 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 TROVE2P10155 538 aaKnown RBP eCLIP15.07■□□□□ 0
ECHDC1-220ENST00000528402 ADRA1DP25100 572 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 SPRP35270 261 aaPredicted RBP15.07■□□□□ 0
ECHDC1-220ENST00000528402 PGFP49763 221 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 YBEYP58557 167 aaPredicted RBP15.07■□□□□ 0
ECHDC1-220ENST00000528402 USP46P62068 366 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 TNK2Q07912 1038 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 EFEMP1Q12805 493 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 MPP3Q13368 585 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 ANKRD20A4Q4UJ75 823 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 MS4A13Q5J8X5 152 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 PCID2Q5JVF3 399 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 RTP2Q5QGT7 225 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 ARTNQ5T4W7 220 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 PIK3R6Q5UE93 754 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 SDHAF4Q5VUM1 108 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 ATG16L1Q676U5 607 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 TPGS2Q68CL5 300 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 KLHDC10Q6PID8 442 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 POTEHQ6S545 545 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 PACS1Q6VY07 963 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 ZNF683Q8IZ20 524 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 NETO2Q8NC67 525 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 SRPK1Q96SB4 655 aaKnown RBP15.07■□□□□ 0
ECHDC1-220ENST00000528402 SEPT5Q99719 369 aaPredicted RBP15.07■□□□□ 0
ECHDC1-220ENST00000528402 KIFC1Q9BW19 673 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 RASSF4Q9H2L5 321 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 MRM3Q9HC36 420 aaKnown RBP15.07■□□□□ 0
ECHDC1-220ENST00000528402 IPO11Q9UI26 975 aaKnown RBP15.07■□□□□ 0
ECHDC1-220ENST00000528402 MAFFQ9ULX9 164 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms