RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 CNGA2Q16280 664 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 PMF1Q6P1K2 205 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 INO80CQ6PI98 192 aaPredicted RBP12.69□□□□□ -0.38
SRPRA-202ENST00000527817 TMC6Q7Z403 805 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 DSG4Q86SJ6 1040 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 GUF1Q8N442 669 aaKnown RBP12.69□□□□□ -0.38
SRPRA-202ENST00000527817 TMEM145Q8NBT3 493 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 FRS2Q8WU20 508 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 CCDC97Q96F63 343 aaPredicted RBP12.69□□□□□ -0.38
SRPRA-202ENST00000527817 IFT43Q96FT9 208 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 HSFY1Q96LI6 401 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 APOLD1Q96LR9 279 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 SLC46A1Q96NT5 459 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 SERPINB11Q96P15 392 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 ABCG4Q9H172 646 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 PPM1HQ9ULR3 514 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 COQ4Q9Y3A0 265 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 NEMP2A6NFY4 417 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 SLC28A2O43868 658 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 FBXO21O94952 628 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 FYNP06241 537 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 VAV1P15498 845 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 STK19P49842 368 aaPredicted RBP12.68□□□□□ -0.38
SRPRA-202ENST00000527817 CSRP3P50461 194 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 CNTN1Q12860 1018 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 CUL2Q13617 745 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 AGBL4Q5VU57 503 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 ATL3Q6DD88 541 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 NEK5Q6P3R8 708 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 LGI2Q8N0V4 545 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 UBR7Q8N806 425 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 OR8D1Q8WZ84 308 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 DUSP23Q9BVJ7 150 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 OSBPL2Q9H1P3 480 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 PREBQ9HCU5 417 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 EVA1BQ9NVM1 165 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 NLGN3Q9NZ94 848 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 CA5BQ9Y2D0 317 aa12.68□□□□□ -0.38
SRPRA-202ENST00000527817 AHCTF1Q8WYP5 2266 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 BOD1L1Q8NFC6 3051 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 LY6G6EA0A0G2JKS1 128 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 PYCARD-AS1I3L0S3 204 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 RIOK3O14730 519 aaKnown RBP12.67□□□□□ -0.38
SRPRA-202ENST00000527817 MCF2LO15068 1137 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 SCAMP1O15126 338 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 ALOX15BO15296 676 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 FFAR2O15552 330 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 ATP9BO43861 1147 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 PIAS2O75928 621 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 PAEPP09466 180 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 TACR2P21452 398 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 RBMS1P29558 406 aaKnown RBP12.67□□□□□ -0.38
SRPRA-202ENST00000527817 RGS7P49802 495 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 NUCB2P80303 420 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 ISXQ2M1V0 245 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 EDRF1Q3B7T1 1238 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 ZCWPW2Q504Y3 356 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 XKR5Q6UX68 686 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 BEND5Q7L4P6 421 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 DCP2Q8IU60 420 aaKnown RBP12.67□□□□□ -0.38
SRPRA-202ENST00000527817 FAM174AQ8TBP5 190 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 DQX1Q8TE96 717 aaKnown RBP12.67□□□□□ -0.38
SRPRA-202ENST00000527817 CLEC4CQ8WTT0 213 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 TFAP2BQ92481 460 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 CCDC47Q96A33 483 aaKnown RBP12.67□□□□□ -0.38
SRPRA-202ENST00000527817 FOXD4L1Q9NU39 408 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 TJP2Q9UDY2 1190 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 IL17BQ9UHF5 180 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 RCOR1Q9UKL0 485 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 U3KQA8 63 aa12.67□□□□□ -0.38
SRPRA-202ENST00000527817 C1QTNF3-AMACRE9PGA6 284 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 PIK3R2O00459 728 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 SLC31A1O15431 190 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 OXCT1P55809 520 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 TAS2R38P59533 333 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 CCDC15Q0P6D6 951 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 STILQ15468 1287 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 ARL13BQ3SXY8 428 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 POM121L1PQ3SYA9 428 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 TPCN2Q8NHX9 752 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 MAPK15Q8TD08 544 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 ERCC4Q92889 916 aaPredicted RBP12.66□□□□□ -0.38
SRPRA-202ENST00000527817 PRR11Q96HE9 360 aaPredicted RBP12.66□□□□□ -0.38
SRPRA-202ENST00000527817 BTN2A3PQ96KV6 586 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 PPP1R9BQ96SB3 815 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 XPO7Q9UIA9 1087 aaKnown RBP12.66□□□□□ -0.38
SRPRA-202ENST00000527817 CFAP45Q9UL16 551 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 SATB2Q9UPW6 733 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 MAPK8IP1Q9UQF2 711 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 NAALADL1Q9UQQ1 740 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 PCDHGA8Q9Y5G5 932 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 HS3ST3A1Q9Y663 406 aa12.66□□□□□ -0.38
SRPRA-202ENST00000527817 A0A1W2PNU3 283 aaPredicted RBP12.65□□□□□ -0.38
SRPRA-202ENST00000527817 CDRT15L2A8MXV6 281 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 K7ESM1 405 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 CETN3O15182 167 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 MOCS2O96007 188 aaPredicted RBP12.65□□□□□ -0.38
SRPRA-202ENST00000527817 EPB41P11171 864 aaKnown RBP12.65□□□□□ -0.38
SRPRA-202ENST00000527817 MYF5P13349 255 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 PDGFRAP16234 1089 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms