RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 A0A1B0GTQ1 180 aa23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 FOXN3O00409 490 aaPredicted RBP23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 BNIP3LO60238 219 aa23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 ERBB2P04626 1255 aa23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 WNT1P04628 370 aa23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 ITGAVP06756 1048 aa23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 NOS2P35228 1153 aa23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 FAM46CQ5VWP2 391 aa23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 SLC47A2Q86VL8 602 aa23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 IRF2BP1Q8IU81 584 aa23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 MDM1Q8TC05 714 aa23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 PLCB1Q9NQ66 1216 aa23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 GDF3Q9NR23 364 aa23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 VPS28Q9UK41 221 aa23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 HS3ST4Q9Y661 456 aa23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 SPEGQ15772 3267 aa23.03■■□□□ 1.28
TRAPPC4-208ENST00000527680 ZZEF1O43149 2961 aa23.02■■□□□ 1.28
TRAPPC4-208ENST00000527680 PLK4O00444 970 aa23.02■■□□□ 1.28
TRAPPC4-208ENST00000527680 PAGE1O75459 146 aa23.02■■□□□ 1.28
TRAPPC4-208ENST00000527680 CAPNS1P04632 268 aa23.02■■□□□ 1.28
TRAPPC4-208ENST00000527680 GGCXP38435 758 aa23.02■■□□□ 1.28
TRAPPC4-208ENST00000527680 DLG2Q15700 870 aa23.02■■□□□ 1.28
TRAPPC4-208ENST00000527680 CXorf57Q6NSI4 855 aaKnown RBP23.02■■□□□ 1.28
TRAPPC4-208ENST00000527680 OLFML1Q6UWY5 402 aa23.02■■□□□ 1.28
TRAPPC4-208ENST00000527680 MARCH9Q86YJ5 346 aa23.02■■□□□ 1.28
TRAPPC4-208ENST00000527680 FRS2Q8WU20 508 aa23.02■■□□□ 1.28
TRAPPC4-208ENST00000527680 MUC3BQ9H195 1237 aa23.02■■□□□ 1.28
TRAPPC4-208ENST00000527680 WDCPQ9H6R7 721 aa23.02■■□□□ 1.28
TRAPPC4-208ENST00000527680 TPX2Q9ULW0 747 aaKnown RBP23.02■■□□□ 1.28
TRAPPC4-208ENST00000527680 PES1O00541 588 aaKnown RBP23.01■■□□□ 1.27
TRAPPC4-208ENST00000527680 WNT9AO14904 365 aa23.01■■□□□ 1.27
TRAPPC4-208ENST00000527680 RTN2O75298 545 aa23.01■■□□□ 1.27
TRAPPC4-208ENST00000527680 CLDN11O75508 207 aa23.01■■□□□ 1.27
TRAPPC4-208ENST00000527680 PRKCSHP14314 528 aaPredicted RBP23.01■■□□□ 1.27
TRAPPC4-208ENST00000527680 MAT2AP31153 395 aaKnown RBP23.01■■□□□ 1.27
TRAPPC4-208ENST00000527680 CLCN1P35523 988 aa23.01■■□□□ 1.27
TRAPPC4-208ENST00000527680 BPIFB4P59827 614 aa23.01■■□□□ 1.27
TRAPPC4-208ENST00000527680 MAN2A1Q16706 1144 aa23.01■■□□□ 1.27
TRAPPC4-208ENST00000527680 POM121L1PQ3SYA9 428 aa23.01■■□□□ 1.27
TRAPPC4-208ENST00000527680 C19orf48Q6RUI8 117 aa23.01■■□□□ 1.27
TRAPPC4-208ENST00000527680 FAM114A1Q8IWE2 563 aa23.01■■□□□ 1.27
TRAPPC4-208ENST00000527680 DMXL2Q8TDJ6 3036 aa23.01■■□□□ 1.27
TRAPPC4-208ENST00000527680 FAM149AA5PLN7 773 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 C1QTNF3-AMACRE9PGA6 284 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 TLR4O00206 839 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 DAB1O75553 588 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 DKK1O94907 266 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 LDOC1O95751 146 aaPredicted RBP23■■□□□ 1.27
TRAPPC4-208ENST00000527680 PNMA6AP0CW24 399 aaPredicted RBP23■■□□□ 1.27
TRAPPC4-208ENST00000527680 DRD3P35462 400 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 ARRB1P49407 418 aaPredicted RBP23■■□□□ 1.27
TRAPPC4-208ENST00000527680 IRAK1P51617 712 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 METAP1P53582 386 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 PTPN20Q4JDL3 420 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 DHRS13Q6UX07 377 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 SLC26A9Q7LBE3 791 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 C14orf80Q86SX3 495 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 ZDHHC17Q8IUH5 632 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 ALG14Q96F25 216 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 TKTL2Q9H0I9 626 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 SIX2Q9NPC8 291 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 RRN3Q9NYV6 651 aa23■■□□□ 1.27
TRAPPC4-208ENST00000527680 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23■■□□□ 1.27
TRAPPC4-208ENST00000527680 AJAP1Q9UKB5 411 aaPredicted RBP23■■□□□ 1.27
TRAPPC4-208ENST00000527680 FARP1Q9Y4F1 1045 aaPredicted RBP23■■□□□ 1.27
TRAPPC4-208ENST00000527680 WDFY3Q8IZQ1 3526 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 A0A1W2PR77 199 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 TRABD2BA6NFA1 517 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 ATP9BO43861 1147 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 CDH4P55283 916 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 PPP2CBP62714 309 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 PPP2CAP67775 309 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 KRT83P78385 493 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 RAPGEF1Q13905 1077 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 HSP90AA4PQ58FG1 418 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 Q6ZVU0 165 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 EID2Q8N6I1 236 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 TMEM35BQ8NCS4 154 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 OR52K2Q8NGK3 314 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 PIP4K2CQ8TBX8 421 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 KDM4CQ9H3R0 1056 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 NDST4Q9H3R1 872 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 SARDHQ9UL12 918 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 STAP1Q9ULZ2 295 aa22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 TP53BP1Q12888 1972 aaPredicted RBP22.99■■□□□ 1.27
TRAPPC4-208ENST00000527680 PKD1L2Q7Z442 2459 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 ENC1O14682 589 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 MCF2LO15068 1137 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 YKT6O15498 198 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 SLC7A4O43246 635 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 SULT1E1P49888 294 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 VASPP50552 380 aaPredicted RBP22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 DEUP1Q05D60 604 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 CNTN1Q12860 1018 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 STAT4Q14765 748 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 VWA3BQ502W6 1294 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 NAPEPLDQ6IQ20 393 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 LRRC31Q6UY01 552 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 MFSD2AQ8NA29 543 aa22.98■■□□□ 1.27
TRAPPC4-208ENST00000527680 ATP11CQ8NB49 1132 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms