RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 FAM3CQ92520 227 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 ZNF592Q92610 1267 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 MS4A14Q96JA4 679 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 FAM118BQ9BPY3 351 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 SLC2A11Q9BYW1 496 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 CARD9Q9H257 536 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 ATP13A1Q9HD20 1204 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 ZDHHC4Q9NPG8 344 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 SAE1Q9UBE0 346 aaPredicted RBP14.06□□□□□ -0.16
CD44-224ENST00000526669 VPS28Q9UK41 221 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 SNX12Q9UMY4 172 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 HEY1Q9Y5J3 304 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 CACNA1IQ9P0X4 2223 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 ILVBLA1L0T0 632 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 TBC1D3BA6NDS4 549 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.05□□□□□ -0.16
CD44-224ENST00000526669 PRRT4C9JH25 899 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 KAT7O95251 611 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 PTPN7P35236 360 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 SERPINB6P35237 376 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 EIF2DP41214 584 aaKnown RBP14.05□□□□□ -0.16
CD44-224ENST00000526669 CTSOP43234 321 aaPredicted RBP14.05□□□□□ -0.16
CD44-224ENST00000526669 PAPOLAP51003 745 aaKnown RBP14.05□□□□□ -0.16
CD44-224ENST00000526669 SLC10A2Q12908 348 aaPredicted RBP14.05□□□□□ -0.16
CD44-224ENST00000526669 PAFAH1B3Q15102 231 aaKnown RBP14.05□□□□□ -0.16
CD44-224ENST00000526669 FAM182AQ5T1J6 154 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 MBLAC2Q68D91 279 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 IL31Q6EBC2 164 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 LEKR1Q6ZMV7 388 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 BBS12Q6ZW61 710 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 UMODL1-AS1Q8N2C9 162 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.05□□□□□ -0.16
CD44-224ENST00000526669 CYB5D2Q8WUJ1 264 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 EZH1Q92800 747 aaPredicted RBP14.05□□□□□ -0.16
CD44-224ENST00000526669 ARHGEF2Q92974 986 aaKnown RBP14.05□□□□□ -0.16
CD44-224ENST00000526669 ALG14Q96F25 216 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 CAPZA3Q96KX2 299 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 FEM1AQ9BSK4 669 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 FOXQ1Q9C009 403 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 CIPCQ9C0C6 399 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 LRRC19Q9H756 370 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 WNT16Q9UBV4 365 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 SLC27A6Q9Y2P4 619 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 ACTL7AQ9Y615 435 aa14.05□□□□□ -0.16
CD44-224ENST00000526669 ARHGAP42A6NI28 874 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 CBX4O00257 560 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 STK25O00506 426 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 DCXO43602 365 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 ZFXP17010 805 aaPredicted RBP14.04□□□□□ -0.16
CD44-224ENST00000526669 POLR2EP19388 210 aaKnown RBP14.04□□□□□ -0.16
CD44-224ENST00000526669 TARSP26639 723 aaKnown RBP14.04□□□□□ -0.16
CD44-224ENST00000526669 GRIA2P42262 883 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 STK19P49842 368 aaPredicted RBP14.04□□□□□ -0.16
CD44-224ENST00000526669 NDST2P52849 883 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 OXCT1P55809 520 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 PRKCQQ04759 706 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 UBXN2BQ14CS0 331 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 KIAA0907Q7Z7F0 614 aaPredicted RBP14.04□□□□□ -0.16
CD44-224ENST00000526669 ADIPOR2Q86V24 386 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 SLC13A5Q86YT5 568 aaPredicted RBP14.04□□□□□ -0.16
CD44-224ENST00000526669 AHI1Q8N157 1196 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 LZTR1Q8N653 840 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 ZNF557Q8N988 423 aaPredicted RBP14.04□□□□□ -0.16
CD44-224ENST00000526669 WFIKKN2Q8TEU8 576 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 UBE2Q2Q8WVN8 375 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 PBKQ96KB5 322 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 MAGEH1Q9H213 219 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 RETREG1Q9H6L5 497 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 RBM12Q9NTZ6 932 aaKnown RBP14.04□□□□□ -0.16
CD44-224ENST00000526669 DTLQ9NZJ0 730 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 OR51B4Q9Y5P0 310 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 ZDBF2Q9HCK1 2354 aa14.04□□□□□ -0.16
CD44-224ENST00000526669 EML5Q05BV3 1969 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 MAN2B1O00754 1011 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 TJP3O95049 919 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 PDGFBP01127 241 aaPredicted RBP14.03□□□□□ -0.16
CD44-224ENST00000526669 FGGP02679 453 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 GLULP15104 373 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 TGM2P21980 687 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 OTUD4Q01804 1114 aaKnown RBP14.03□□□□□ -0.16
CD44-224ENST00000526669 GRSF1Q12849 480 aaKnown RBP eCLIP14.03□□□□□ -0.16
CD44-224ENST00000526669 SLC12A1Q13621 1099 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 LONRF2Q1L5Z9 754 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 PARP15Q460N3 678 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 TMEM196Q5HYL7 178 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 EMC10Q5UCC4 262 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 PAPD7Q5XG87 772 aaKnown RBP14.03□□□□□ -0.16
CD44-224ENST00000526669 AFMIDQ63HM1 303 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 EGFLAMQ63HQ2 1017 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 LINGO4Q6UY18 593 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 ZNF852Q6ZMS4 543 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 ZNF783Q6ZMS7 281 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 ATPAF2Q8N5M1 289 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 ERLEC1Q96DZ1 483 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 MSANTD3Q96H12 275 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 RPL10LQ96L21 214 aaKnown RBP14.03□□□□□ -0.16
CD44-224ENST00000526669 TBC1D17Q9HA65 648 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 SP110Q9HB58 689 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 DONSONQ9NYP3 566 aa14.03□□□□□ -0.16
CD44-224ENST00000526669 VPS51Q9UID3 782 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms