RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 CEP57L1Q8IYX8 460 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 CARNMT1Q8N4J0 409 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 PTGR2Q8N8N7 351 aaPredicted RBP5.14□□□□□ -1.59
CD44-220ENST00000525688 OR52L2PQ8NGH6 319 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 LINC00476Q8WZB0 136 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 TFAP2BQ92481 460 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 N4BP2L2Q92802 583 aaPredicted RBP5.14□□□□□ -1.59
CD44-220ENST00000525688 RADILQ96JH8 1075 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 CFAP53Q96M91 514 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 MPHOSPH8Q99549 860 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 BAG1Q99933 345 aaPredicted RBP5.14□□□□□ -1.59
CD44-220ENST00000525688 CINPQ9BW66 212 aaPredicted RBP5.14□□□□□ -1.59
CD44-220ENST00000525688 FSD1LQ9BXM9 530 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 JMJD4Q9H9V9 463 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 SAP30LQ9HAJ7 183 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 PLSCR4Q9NRQ2 329 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 SNX15Q9NRS6 342 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 ABCF3Q9NUQ8 709 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 TBK1Q9UHD2 729 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 PIK3C2BO00750 1634 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 TMEM2Q9UHN6 1383 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 SETD5Q9C0A6 1442 aa5.14□□□□□ -1.59
CD44-220ENST00000525688 ADGRB3O60242 1522 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 A0A087X0M5 115 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 A0A1B0GX30 115 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 VWA3AA6NCI4 1184 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 STX16-NPEPL1H3BU86 382 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 CES2O00748 559 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 STX16O14662 325 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 HNRNPRO43390 633 aaKnown RBP5.13□□□□□ -1.59
CD44-220ENST00000525688 ZBED4O75132 1171 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 URI1O94763 535 aaPredicted RBP5.13□□□□□ -1.59
CD44-220ENST00000525688 HEXIM1O94992 359 aaKnown RBP5.13□□□□□ -1.59
CD44-220ENST00000525688 TMIGD3P0DMS9 266 aaPredicted RBP5.13□□□□□ -1.59
CD44-220ENST00000525688 ATP1A3P13637 1013 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 ALADP13716 330 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 ATP6V1B1P15313 513 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 IGHMBP2P38935 993 aaKnown RBP5.13□□□□□ -1.59
CD44-220ENST00000525688 GRIA3P42263 894 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 LIFRP42702 1097 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 DIO1P49895 249 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 FOXL2P58012 376 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 TMF1P82094 1093 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 PTPAQ15257 358 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 PARP10Q53GL7 1025 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 CC2D1BQ5T0F9 858 aaKnown RBP5.13□□□□□ -1.59
CD44-220ENST00000525688 ISM2Q6H9L7 571 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 MCM10Q7L590 875 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 SDCCAG8Q86SQ7 713 aaPredicted RBP5.13□□□□□ -1.59
CD44-220ENST00000525688 GALNT13Q8IUC8 556 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 ABHD11Q8NFV4 315 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 TRMT61AQ96FX7 289 aaKnown RBP5.13□□□□□ -1.59
CD44-220ENST00000525688 PRR11Q96HE9 360 aaPredicted RBP5.13□□□□□ -1.59
CD44-220ENST00000525688 LENG8Q96PV6 779 aaPredicted RBP5.13□□□□□ -1.59
CD44-220ENST00000525688 PIGSQ96S52 555 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 ADPGKQ9BRR6 497 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 CCDC68Q9H2F9 335 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 CDCP1Q9H5V8 836 aa5.13□□□□□ -1.59
CD44-220ENST00000525688 GAR1Q9NY12 217 aaKnown RBP5.13□□□□□ -1.59
CD44-220ENST00000525688 NPHP4O75161 1426 aaPredicted RBP5.13□□□□□ -1.59
CD44-220ENST00000525688 SCAF11Q99590 1463 aaKnown RBP5.13□□□□□ -1.59
CD44-220ENST00000525688 TMEM131LA2VDJ0 1609 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 POLR1AO95602 1720 aaPredicted RBP5.12□□□□□ -1.59
CD44-220ENST00000525688 CYP3A7-CYP3A51PA0A087WV96 503 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 B4DLN1 442 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 H7C0S8 307 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 ESRRBO95718 433 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 MBPP02686 304 aaPredicted RBP5.12□□□□□ -1.59
CD44-220ENST00000525688 IGFBP2P18065 325 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 CYP3A7P24462 503 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 DUSP1P28562 367 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 CYP2C18P33260 490 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 MPLP40238 635 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 AVPR1BP47901 424 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 NR1H2P55055 460 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 TXNL4AP83876 142 aaKnown RBP5.12□□□□□ -1.59
CD44-220ENST00000525688 PSG6Q00889 435 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 CCDC15Q0P6D6 951 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 PDCLQ13371 301 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 TRIM29Q14134 588 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 E2F5Q15329 346 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 ZNF484Q5JVG2 852 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 ARMC4Q5T2S8 1044 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 TMEM63BQ5T3F8 832 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 ATG16L1Q676U5 607 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 ANKRD40Q6AI12 368 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 ANO7Q6IWH7 933 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 UNC5DQ6UXZ4 953 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 HEATR4Q86WZ0 1026 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 NBPF5PQ86XG9 351 aaPredicted RBP5.12□□□□□ -1.59
CD44-220ENST00000525688 VSIG1Q86XK7 387 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 LCORLQ8N3X6 602 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 LINC01465Q8N7H1 131 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 C12orf76Q8N812 135 aaPredicted RBP5.12□□□□□ -1.59
CD44-220ENST00000525688 FAM71DQ8N9W8 422 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 FSIP1Q8NA03 581 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 EDC3Q96F86 508 aaKnown RBP5.12□□□□□ -1.59
CD44-220ENST00000525688 SNX18Q96RF0 628 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 SDF4Q9BRK5 362 aa5.12□□□□□ -1.59
CD44-220ENST00000525688 ANP32EQ9BTT0 268 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms